RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SIX6OS1	Q8N1H7	587 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	PHTF2	Q8N3S3	785 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	SHC3	Q92529	594 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	LOXL4	Q96JB6	756 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	FAM81B	Q96LP2	452 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	TUBGCP2	Q9BSJ2	902 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	NDST4	Q9H3R1	872 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	SPHK2	Q9NRA0	654 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	SAMSN1	Q9NSI8	373 aa	Known RBP	13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	RASAL2	Q9UJF2	1139 aa		13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	LSM7	Q9UK45	103 aa	Known RBP	13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.95	□□□□□ -0.18
SREBF1-223	ENST00000584760	CHD6	Q8TD26	2715 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	CACNA1G	O43497	2377 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	KCNJ18	B7U540	433 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760		K7EQS6	105 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	ATG13	O75143	517 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	EPN2	O95208	641 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	KCNK5	O95279	499 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	MBD3	O95983	291 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	KLKB1	P03952	638 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	PRKCSH	P14314	528 aa	Predicted RBP	13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	SLC6A11	P48066	632 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	RGS7	P49802	495 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	MFAP3	P55082	362 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	DAOA	P59103	153 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	GAD2	Q05329	585 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	EFEMP1	Q12805	493 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	KCNJ12	Q14500	433 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	MEA1	Q16626	185 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	DPY19L2P1	Q6NXN4	242 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	RSRC2	Q7L4I2	434 aa	Known RBP	13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	TMEM25	Q86YD3	366 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	RPLP0P6	Q8NHW5	317 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	ENOX1	Q8TC92	643 aa	Known RBP	13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	ACP6	Q9NPH0	428 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	MARK1	Q9P0L2	795 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	MARCH2	Q9P0N8	246 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	SLC8A2	Q9UPR5	921 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	NFE2L3	Q9Y4A8	694 aa		13.94	□□□□□ -0.18
SREBF1-223	ENST00000584760	ANTXRL	A6NF34	631 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	PIK3R2	O00459	728 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	LCP1	P13796	627 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	EEF1G	P26641	437 aa	Known RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	GNA15	P30679	374 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	GPD2	P43304	727 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	RPL34	P49207	117 aa	Known RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	COG7	P83436	770 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	KDSR	Q06136	332 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	ARHGAP44	Q17R89	818 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	TCP11X2	Q5H9J9	407 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	CDKAL1	Q5VV42	579 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	BSPRY	Q5W0U4	402 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	SMYD5	Q6GMV2	418 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	DENND1B	Q6P3S1	775 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	SYT13	Q7L8C5	426 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	USP33	Q8TEY7	942 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	CLEC4C	Q8WTT0	213 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	ZNF606	Q8WXB4	792 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	IRGQ	Q8WZA9	623 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	P2RY11	Q96G91	374 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	HSFY1	Q96LI6	401 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	PNKP	Q96T60	521 aa		13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	LSM14B	Q9BX40	385 aa	Known RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	OLA1	Q9NTK5	396 aa	Known RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.93	□□□□□ -0.18
SREBF1-223	ENST00000584760	PLXND1	Q9Y4D7	1925 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760		A0A0A0MRY4	1105 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	MED7	O43513	233 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	CACNG3	O60359	315 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	TULP3	O75386	442 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	LETM1	O95202	739 aa	Predicted RBP	13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	KAT7	O95251	611 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	PROS1	P07225	676 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	MPL	P40238	635 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	KCNMA1	Q12791	1236 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	ANO4	Q32M45	955 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	PLA2G2C	Q5R387	149 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	CCDC183	Q5T5S1	534 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	BTBD8	Q5XKL5	378 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	RNF43	Q68DV7	783 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	TCEAL6	Q6IPX3	200 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	PSAPL1	Q6NUJ1	521 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	MSANTD2	Q6P1R3	559 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	CCDC26	Q8TAB7	109 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	EDEM1	Q92611	657 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	TCEAL3	Q969E4	200 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	ACD	Q96AP0	544 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	ARHGEF4	Q9NR80	690 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	STRIP2	Q9ULQ0	834 aa		13.92	□□□□□ -0.18
SREBF1-223	ENST00000584760	RALGAPA1	Q6GYQ0	2036 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	CFAP47	Q6ZTR5	3102 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	CCDC163	A0A0D9SF12	145 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	SLC12A8	A0AV02	714 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	C1QTNF9B	B2RNN3	333 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	NEDD8-MDP1	E9PL57	170 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	THAP12	O43422	761 aa		13.91	□□□□□ -0.18
SREBF1-223	ENST00000584760	FBXO21	O94952	628 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms