RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 UBQLN1Q9UMX0 589 aaKnown RBP11.85□□□□□ -0.51
GGA3-205ENST00000578348 KLHL33A6NCF5 533 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 SMAPO00193 183 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 GSC2O15499 205 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 FAM155BO75949 473 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 RECQL4O94761 1208 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 DLDP09622 509 aaKnown RBP11.85□□□□□ -0.51
GGA3-205ENST00000578348 DHRS4L1P0CG22 281 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 MYL2P10916 166 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 CYP2B6P20813 491 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 PEX19P40855 299 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 NEK3P51956 506 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 CCDC6Q16204 474 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 GOLGA7BQ2TAP0 167 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 ANO7Q6IWH7 933 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 TTC7BQ86TV6 843 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 CTAGE3PQ8IX95 158 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 TEX9Q8N6V9 391 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 UBA3Q8TBC4 463 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 SLC44A1Q8WWI5 657 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 DNAJC9Q8WXX5 260 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 SKA1Q96BD8 255 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 CFAP36Q96G28 342 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 NSL1Q96IY1 281 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 IQCGQ9H095 443 aaKnown RBP11.85□□□□□ -0.51
GGA3-205ENST00000578348 NXF3Q9H4D5 531 aaKnown RBP11.85□□□□□ -0.51
GGA3-205ENST00000578348 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.85□□□□□ -0.51
GGA3-205ENST00000578348 ZFATQ9P243 1243 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 TSPAN16Q9UKR8 245 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 RPL26L1Q9UNX3 145 aaKnown RBP11.85□□□□□ -0.51
GGA3-205ENST00000578348 MTO1Q9Y2Z2 717 aaKnown RBP11.85□□□□□ -0.51
GGA3-205ENST00000578348 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
GGA3-205ENST00000578348 DOCK3Q8IZD9 2030 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 C17orf102A2RUQ5 167 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 TREHO43280 583 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 XPOTO43592 962 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 TRUB2O95900 331 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 CD4P01730 458 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 LMNAP02545 664 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 GNAT1P11488 350 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 CRYBB1P53674 252 aaPredicted RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 CDH6P55285 790 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 INHBEP58166 350 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 KPNB1Q14974 876 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 RCN1Q15293 331 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 FAM102AQ5T9C2 384 aaPredicted RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 SH3PXD2AQ5TCZ1 1133 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 C9orf57Q5W0N0 161 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 RINLQ6ZS11 566 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PRPF39Q86UA1 669 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 UNC93AQ86WB7 457 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 CHSY1Q86X52 802 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 LMNTD2Q8IXW0 634 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 VPS52Q8N1B4 723 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 NME8Q8N427 588 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 CMASQ8NFW8 434 aaPredicted RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 SH3TC2Q8TF17 1288 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PPP1R13LQ8WUF5 828 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 FAF2Q96CS3 445 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PEBP4Q96S96 227 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 MRPL45Q9BRJ2 306 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 CXCL16Q9H2A7 254 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 ASNSD1Q9NWL6 643 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 ARMCX1Q9P291 453 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 GJD2Q9UKL4 321 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PIN4Q9Y237 131 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 TEX264Q9Y6I9 313 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 TRIP11Q15643 1979 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 H7C0C1 242 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PIK3R2O00459 728 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 COPEO14579 308 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PPEF2O14830 753 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PFKMP08237 780 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 ESRRAP11474 423 aaPredicted RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 TSHRP16473 764 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 GPD1P21695 349 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 HOXC8P31273 242 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 ATP5OP48047 213 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 SERPINB4P48594 390 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 BEX3Q00994 111 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 RAB6CQ53S08 254 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 RGMBQ6NW40 437 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 C1orf228Q6PIY5 440 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 CDHR3Q6ZTQ4 885 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 PPM1NQ8N819 430 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 C18orf25Q96B23 403 aaPredicted RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 ZNF560Q96MR9 790 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 SRPK1Q96SB4 655 aaKnown RBP11.84□□□□□ -0.51
GGA3-205ENST00000578348 TUBB6Q9BUF5 446 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 MECRQ9BV79 373 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 RAB6CQ9H0N0 254 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 RSAD1Q9HA92 442 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 ZFYVE28Q9HCC9 887 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
GGA3-205ENST00000578348 SPATS2LQ9NUQ6 558 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms