RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 SH2D5Q6ZV89 423 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 RSPH3Q86UC2 560 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 TSSK1BQ9BXA7 367 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 TRIM55Q9BYV6 548 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 ALG13Q9NP73 1137 aaKnown RBP24.6■■□□□ 1.53
STRN3-207ENST00000555358 ARL8BQ9NVJ2 186 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 HEY2Q9UBP5 337 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 CHMP2BQ9UQN3 213 aa24.6■■□□□ 1.53
STRN3-207ENST00000555358 A0A0G2JND7 137 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 H0Y3Z8 333 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 CILPO75339 1184 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 PTDSS1P48651 473 aaKnown RBP24.59■■□□□ 1.53
STRN3-207ENST00000555358 SESTD1Q86VW0 696 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 CHSY1Q86X52 802 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 FAM71DQ8N9W8 422 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 PCSK9Q8NBP7 692 aaKnown RBP24.59■■□□□ 1.53
STRN3-207ENST00000555358 SLC4A11Q8NBS3 891 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 MICAL1Q8TDZ2 1067 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 SKA1Q96BD8 255 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 SERAC1Q96JX3 654 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 CYTH2Q99418 400 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 SMIM28A0A1B0GU29 152 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 A6NHS1 94 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 APOC4-APOC2K7ER74 178 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 DNAJC6O75061 913 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 APOC2P02655 101 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 MGAT3Q09327 533 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 CAPRIN2Q6IMN6 1127 aaKnown RBP24.59■■□□□ 1.53
STRN3-207ENST00000555358 TEX9Q8N6V9 391 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 LHX5Q9H2C1 402 aa24.59■■□□□ 1.53
STRN3-207ENST00000555358 TRMT13Q9NUP7 481 aaKnown RBP24.59■■□□□ 1.53
STRN3-207ENST00000555358 MEIS3P2A8K0S8 358 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 LPXNO60711 386 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 CCDC22O60826 627 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 HAUS5O94927 633 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 MT-ND3P03897 115 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 ATP6V1C1P21283 382 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 THPOP40225 353 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 NRLP54845 237 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 EIF3EP60228 445 aaKnown RBP24.58■■□□□ 1.53
STRN3-207ENST00000555358 DPYSL3Q14195 570 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 EMC1Q8N766 993 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 BEST2Q8NFU1 509 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 ZNF296Q8WUU4 475 aaPredicted RBP24.58■■□□□ 1.53
STRN3-207ENST00000555358 APOPT1Q96IL0 206 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 DCLRE1BQ9H816 532 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 AGO3Q9H9G7 860 aaKnown RBP24.58■■□□□ 1.53
STRN3-207ENST00000555358 CYP3A43Q9HB55 503 aa24.58■■□□□ 1.53
STRN3-207ENST00000555358 STAU1O95793 577 aaKnown RBP24.58■■□□□ 1.52
STRN3-207ENST00000555358 P4HA1P13674 534 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 ELK3P41970 407 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 PSMC1P62191 440 aaKnown RBP24.58■■□□□ 1.52
STRN3-207ENST00000555358 BASP1P80723 227 aaKnown RBP24.58■■□□□ 1.52
STRN3-207ENST00000555358 SLC18A2Q05940 514 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 PTK7Q13308 1070 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 ITGA7Q13683 1181 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 PRKD1Q15139 912 aaPredicted RBP24.58■■□□□ 1.52
STRN3-207ENST00000555358 TAF5Q15542 800 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 TRIM68Q6AZZ1 485 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 RNF180Q86T96 592 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 RFX6Q8HWS3 928 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 CMASQ8NFW8 434 aaPredicted RBP24.58■■□□□ 1.52
STRN3-207ENST00000555358 PXYLP1Q8TE99 480 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 SLC44A1Q8WWI5 657 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 PRR11Q96HE9 360 aaPredicted RBP24.58■■□□□ 1.52
STRN3-207ENST00000555358 BTBD10Q9BSF8 475 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 GOLGA2P5Q9HBQ8 144 aa24.58■■□□□ 1.52
STRN3-207ENST00000555358 TCRBV9S1A1TA0A576 114 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 CFAP69A5D8W1 941 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 TGDSO95455 350 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 LMNAP02545 664 aaKnown RBP24.57■■□□□ 1.52
STRN3-207ENST00000555358 INHAP05111 366 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 ARFIP2P53365 341 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 ACLYP53396 1101 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 KHDC1Q4VXA5 237 aaKnown RBP24.57■■□□□ 1.52
STRN3-207ENST00000555358 ANO7Q6IWH7 933 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 XYLT1Q86Y38 959 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 CPXM1Q96SM3 734 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 METTL5Q9NRN9 209 aaKnown RBP24.57■■□□□ 1.52
STRN3-207ENST00000555358 IQANK1A0A1B0GTG1 560 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 CCDC189A1A4V9 331 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 DLDP09622 509 aaKnown RBP24.57■■□□□ 1.52
STRN3-207ENST00000555358 CDK16Q00536 496 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 SOX4Q06945 474 aaPredicted RBP24.57■■□□□ 1.52
STRN3-207ENST00000555358 XKR4Q5GH76 650 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 C9orf57Q5W0N0 161 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 DSTYKQ6XUX3 929 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 KCTD6Q8NC69 237 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 TMEM120AQ9BXJ8 343 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 OSBPL1AQ9BXW6 950 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 PCSK1NQ9UHG2 260 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 UBQLN1Q9UMX0 589 aaKnown RBP24.57■■□□□ 1.52
STRN3-207ENST00000555358 SNX9Q9Y5X1 595 aa24.57■■□□□ 1.52
STRN3-207ENST00000555358 GSC2O15499 205 aa24.56■■□□□ 1.52
STRN3-207ENST00000555358 RBP3P10745 1247 aa24.56■■□□□ 1.52
STRN3-207ENST00000555358 SERPINB3P29508 390 aa24.56■■□□□ 1.52
STRN3-207ENST00000555358 NDST1P52848 882 aa24.56■■□□□ 1.52
STRN3-207ENST00000555358 PTPN11Q06124 597 aaPredicted RBP24.56■■□□□ 1.52
STRN3-207ENST00000555358 FAAP100Q0VG06 881 aa24.56■■□□□ 1.52
STRN3-207ENST00000555358 KBTBD12Q3ZCT8 623 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms