RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 PMM1Q92871 262 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 COQ8BQ96D53 544 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 LRRC46Q96FV0 321 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 CCDC138Q96M89 665 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 RIPOR3Q96MK2 946 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 MYD88Q99836 296 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 QTRT1Q9BXR0 403 aaKnown RBP3.88□□□□□ -1.79
VRK1-202ENST00000553683 PCDHAC1Q9H158 963 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 VPS45Q9NRW7 570 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 LPAR3Q9UBY5 353 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 ASAP1Q9ULH1 1129 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 PHTF1Q9UMS5 762 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 MAN2B2Q9Y2E5 1009 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 SPATA31A5Q5VU36 1347 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 SPATA31A7Q8IWB4 1347 aa3.88□□□□□ -1.79
VRK1-202ENST00000553683 WDR91A4D1P6 747 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 TTC34A8MYJ7 566 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 CNOT3O75175 753 aaKnown RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 MBPP02686 304 aaPredicted RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 EEF1GP26641 437 aaKnown RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 TACR3P29371 465 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 MPGP29372 298 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 GHRHRQ02643 423 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 SRSF1Q07955 248 aaKnown RBP eCLIP3.87□□□□□ -1.79
VRK1-202ENST00000553683 LAMB3Q13751 1172 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 PFKFB3Q16875 520 aaPredicted RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 SLC35G1Q2M3R5 365 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 TRIM71Q2Q1W2 868 aaKnown RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 GLE1Q53GS7 698 aaKnown RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 TMTC4Q5T4D3 741 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 TTC30AQ86WT1 665 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 P3H2Q8IVL5 708 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 C16orf71Q8IYS4 520 aaPredicted RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 TXLNBQ8N3L3 684 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 GLIS1Q8NBF1 620 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 OSR1Q8TAX0 266 aaPredicted RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 GLMPQ8WWB7 406 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 MAP4K1Q92918 833 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 CUL5Q93034 780 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 TNIP3Q96KP6 325 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 PAAF1Q9BRP4 392 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 EFHD1Q9BUP0 239 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 ADGRE3Q9BY15 652 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 SLC29A3Q9BZD2 475 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 USP29Q9HBJ7 922 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 DTNAQ9Y4J8 743 aa3.87□□□□□ -1.79
VRK1-202ENST00000553683 SIRT4Q9Y6E7 314 aaPredicted RBP3.87□□□□□ -1.79
VRK1-202ENST00000553683 GXYLT2A0PJZ3 443 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 FYB1O15117 783 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 ZSCAN9O15535 394 aaPredicted RBP3.86□□□□□ -1.79
VRK1-202ENST00000553683 DHHO43323 396 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PLIN1O60240 522 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PLA2G6O60733 806 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PRAMEF2O60811 474 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 SGPL1O95470 568 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 NTSR2O95665 410 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 TOP3BO95985 862 aaKnown RBP3.86□□□□□ -1.79
VRK1-202ENST00000553683 SFPQP23246 707 aaKnown RBP eCLIP3.86□□□□□ -1.79
VRK1-202ENST00000553683 LMO1P25800 156 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 GALNSP34059 522 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 THBS4P35443 961 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PBX1P40424 430 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 MMP13P45452 471 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 WDR5P61964 334 aaKnown RBP3.86□□□□□ -1.79
VRK1-202ENST00000553683 RPS13P62277 151 aaKnown RBP3.86□□□□□ -1.79
VRK1-202ENST00000553683 CFHR1Q03591 330 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 SEMA3BQ13214 749 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PMS2P11Q13670 270 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 LONRF1Q17RB8 773 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 SUPT20HL1Q3ZLR7 823 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PXDC1Q5TGL8 231 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 RAP1GAP2Q684P5 730 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 MRPL10Q7Z7H8 261 aaKnown RBP3.86□□□□□ -1.79
VRK1-202ENST00000553683 OR52L2PQ8NGH6 319 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 PRSS3P2Q8NHM4 247 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 SCARB1Q8WTV0 552 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 RSC1A1Q92681 617 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 GJA10Q969M2 543 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 ZNF566Q969W8 418 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 GRAMD1AQ96CP6 724 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 SGCZQ96LD1 299 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 ZNF778Q96MU6 729 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 STK33Q9BYT3 514 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 NUAK2Q9H093 628 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 ERVK-5Q9HDB9 667 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 ABHD10Q9NUJ1 306 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 NFU1Q9UMS0 254 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 CEP83Q9Y592 693 aa3.86□□□□□ -1.79
VRK1-202ENST00000553683 CA12O43570 354 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 FGBP02675 491 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 CD63P08962 238 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 HARSP12081 509 aaKnown RBP3.85□□□□□ -1.79
VRK1-202ENST00000553683 HOXD12P35452 270 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 IGHMBP2P38935 993 aaKnown RBP3.85□□□□□ -1.79
VRK1-202ENST00000553683 GSTM5P46439 218 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 HSPA7P48741 367 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 CNGA3Q16281 694 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 MPEG1Q2M385 716 aa3.85□□□□□ -1.79
VRK1-202ENST00000553683 TMEM196Q5HYL7 178 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms