RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PRR11Q96HE9 360 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-210ENST00000525878 NLRP4Q96MN2 994 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 CINPQ9BW66 212 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-210ENST00000525878 PCDHA12Q9UN75 941 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 PROCRQ9UNN8 238 aa4.87□□□□□ -1.63
CSDE1-210ENST00000525878 SLC22A23A1A5C7 686 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 CFAP69A5D8W1 941 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 CTIFO43310 598 aaKnown RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 SNX2O60749 519 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 TMIGD3P0DMS9 266 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 T-ENOLP0DO92 83 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 IBSPP21815 317 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 IL6STP40189 918 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 WDR5P61964 334 aaKnown RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 KCNAB1Q14722 419 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 MZT2AQ6P582 158 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 ZCWPW1Q9H0M4 648 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 ARL8BQ9NVJ2 186 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 DDX56Q9NY93 547 aaKnown RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 ZIM2Q9NZV7 527 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 ZNF112Q9UJU3 913 aa4.86□□□□□ -1.63
CSDE1-210ENST00000525878 SIRT4Q9Y6E7 314 aaPredicted RBP4.86□□□□□ -1.63
CSDE1-210ENST00000525878 TRBV5-3A0A0A0MS03 114 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 A0A0G2JK05 382 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 SLC28A2O43868 658 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 USP12O75317 370 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 INMTO95050 263 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 TMEM225BP0DP42 221 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 ZKSCAN1P17029 563 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-210ENST00000525878 IDUAP35475 653 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 EPHB1P54762 984 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 SLC12A2P55011 1212 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 CXorf57Q6NSI4 855 aaKnown RBP4.85□□□□□ -1.63
CSDE1-210ENST00000525878 RBM44Q6ZP01 1051 aaKnown RBP4.85□□□□□ -1.63
CSDE1-210ENST00000525878 SESTD1Q86VW0 696 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 MSLNLQ96KJ4 702 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 FAM227BQ96M60 508 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 ZPBPQ9BS86 351 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 SAP30LQ9HAJ7 183 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 MSRB1Q9NZV6 116 aa4.85□□□□□ -1.63
CSDE1-210ENST00000525878 A6NNZ2 444 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 PRPF3O43395 683 aaKnown RBP4.84□□□□□ -1.63
CSDE1-210ENST00000525878 ATG13O75143 517 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 NDUFB8O95169 186 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 ALDH7A1P49419 539 aaKnown RBP4.84□□□□□ -1.63
CSDE1-210ENST00000525878 ACOX1Q15067 660 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 UNC13DQ70J99 1090 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 MBD3L2Q8NHZ7 208 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-210ENST00000525878 ZNF479Q96JC4 524 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 TUBB6Q9BUF5 446 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 SLCO5A1Q9H2Y9 848 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 MRPL44Q9H9J2 332 aaKnown RBP4.84□□□□□ -1.63
CSDE1-210ENST00000525878 C1orf112Q9NSG2 853 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 DECR2Q9NUI1 292 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 HPSEQ9Y251 543 aa4.84□□□□□ -1.63
CSDE1-210ENST00000525878 LACTBL1A8MY62 500 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 F8W810 466 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 SPTLC2O15270 562 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 WDR47O94967 919 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 MYF5P13349 255 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 HOXB2P14652 356 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 PGGT1BP53609 377 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 RAE1P78406 368 aaKnown RBP4.83□□□□□ -1.64
CSDE1-210ENST00000525878 ZXDBP98169 803 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 RHDQ02161 417 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 PRTGQ2VWP7 1150 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 AASDHQ4L235 1098 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-210ENST00000525878 ZNF585BQ52M93 769 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 Q6ZTC4 211 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 RFX8Q6ZV50 586 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 SLC44A5Q8NCS7 719 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 SUN3Q8TAQ9 357 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 PIGKQ92643 395 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 APIPQ96GX9 242 aa4.83□□□□□ -1.64
CSDE1-210ENST00000525878 RNF26Q9BY78 433 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-210ENST00000525878 MOV10Q9HCE1 1003 aaKnown RBP4.83□□□□□ -1.64
CSDE1-210ENST00000525878 PAPOLBQ9NRJ5 636 aaKnown RBP4.83□□□□□ -1.64
CSDE1-210ENST00000525878 TMEM272A0A1B0GTI8 110 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 CBFA2T3O75081 653 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 U2AF1L5P0DN76 240 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 TBXAS1P24557 533 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 MT3P25713 68 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 SOX2P48431 317 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 CACNB3P54284 484 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 U2AF1Q01081 240 aaKnown RBP eCLIP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 KCNJ12Q14500 433 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 POLD3Q15054 466 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 DCP1BQ8IZD4 617 aaKnown RBP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 ASB5Q8WWX0 329 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 LRTOMTQ8WZ04 291 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 PPP1R10Q96QC0 940 aaKnown RBP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 TMEM204Q9BSN7 226 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 LRRC27Q9C0I9 530 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 ABHD10Q9NUJ1 306 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 AGO2Q9UKV8 859 aaKnown RBP4.82□□□□□ -1.64
CSDE1-210ENST00000525878 COG5Q9UP83 839 aa4.82□□□□□ -1.64
CSDE1-210ENST00000525878 A0A1W2PPC1 479 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 PRYO14603 147 aa4.81□□□□□ -1.64
CSDE1-210ENST00000525878 SYF2O95926 243 aaKnown RBP4.81□□□□□ -1.64
CSDE1-210ENST00000525878 PLA2G2AP14555 144 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms