RNA–Protein interactions for RNA: ENST00000525530.1

PPFIA1-203, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-203ENST00000525530 TRIM43BA6NCK2 446 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 VPS4BO75351 444 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 DDX58O95786 925 aaKnown RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 IGLV2-14P01704 120 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 KRT18P05783 430 aaKnown RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 MYL1P05976 194 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 IGKV5-2P06315 115 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SRGNP10124 158 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 DPEP1P16444 411 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 NPTX2P47972 431 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 ELLP55199 621 aaPredicted RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SUMO3P55854 103 aaPredicted RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 UCP3P55916 312 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 FMO1Q01740 532 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 AIMP1Q12904 312 aaKnown RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SLC13A2Q13183 592 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 CTBP1Q13363 440 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 CD300EQ496F6 205 aaPredicted RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 LONRF3Q496Y0 759 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 PREPLQ4J6C6 727 aaPredicted RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 COBLL1Q53SF7 1204 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SUSD4Q5VX71 490 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SLC30A10Q6XR72 485 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 PPP1R42Q7Z4L9 355 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 NBPF5PQ86XG9 351 aaPredicted RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 LNX2Q8N448 690 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 CNBD1Q8NA66 436 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 CCDC191Q8NCU4 936 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SNX19Q92543 992 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 TRIM43Q96BQ3 446 aaPredicted RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 MSLNLQ96KJ4 702 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SLC46A1Q96NT5 459 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 OSBPL9Q96SU4 736 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 STK31Q9BXU1 1019 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 ZNF518BQ9C0D4 1074 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 SMOC2Q9H3U7 446 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 KIAA1586Q9HCI6 787 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 TBCCD1Q9NVR7 557 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 CPNE7Q9UBL6 633 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 TESQ9UGI8 421 aaKnown RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 AFF4Q9UHB7 1163 aaKnown RBP5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 PTPRCP08575 1304 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 CDHR2Q9BYE9 1310 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 MYH8P13535 1937 aa5.66□□□□□ -1.5
PPFIA1-203ENST00000525530 A0A0G2JLW4 131 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 ANO9A1A5B4 782 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 PI4KAP2A4QPH2 592 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 DCLK1O15075 740 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 TBC1D4O60343 1298 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 ATXN1LP0C7T5 689 aaKnown RBP5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 CYP2C9P11712 490 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 SLC5A1P13866 664 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 GCLCP48506 637 aaPredicted RBP5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 RARRES1P49788 294 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 NDUFV1P49821 464 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 RAB32Q13637 225 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 SLC44A4Q53GD3 710 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 CCAR1Q8IX12 1150 aaKnown RBP5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 FAM109AQ8N4B1 249 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 DNAJC5GQ8N7S2 189 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 PI4KAP1Q8N8J0 262 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 SSH3Q8TE77 659 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 SLC9A6Q92581 669 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 Q96MF0 132 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 ZNF287Q9HBT7 754 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 SEMA4GQ9NTN9 838 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 TLK1Q9UKI8 766 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 OGDHLQ9ULD0 1010 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 FAM50BQ9Y247 325 aa5.65□□□□□ -1.5
PPFIA1-203ENST00000525530 RTL9Q8NET4 1388 aa5.65□□□□□ -1.51
PPFIA1-203ENST00000525530 COL4A5P29400 1685 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 MBD3L4A6NDZ8 208 aaPredicted RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 MBD3L3A6NE82 208 aaPredicted RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 LRRC3CA6NJW4 275 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 H0YIN7 160 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 MYO1CO00159 1063 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 FOXN3O00409 490 aaPredicted RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 PROM1O43490 865 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 PQBP1O60828 265 aaKnown RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 PCCAP05165 728 aaPredicted RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 CDK4P11802 303 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 CHRM3P20309 590 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 ITGALP20701 1170 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 GATA3P23771 443 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 GPTP24298 496 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 CHRNA5P30532 468 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 ZNF134P52741 427 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 RARSP54136 660 aaKnown RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 LOXL3P58215 753 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 IQCB1Q15051 598 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 SF3B3Q15393 1217 aaKnown RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 ERCC6LQ2NKX8 1250 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 BEND3Q5T5X7 828 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 NOL8Q76FK4 1167 aaKnown RBP5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 C11orf96Q7Z7L8 435 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 SESTD1Q86VW0 696 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 MICU3Q86XE3 530 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 GAS2L3Q86XJ1 694 aa5.64□□□□□ -1.51
PPFIA1-203ENST00000525530 SRRM1Q8IYB3 904 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms