RNA–Protein interactions for RNA: ENST00000525530.1

PPFIA1-203, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-203ENST00000525530 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
PPFIA1-203ENST00000525530 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
PPFIA1-203ENST00000525530 SENP3Q9H4L4 574 aaPredicted RBP26.27■■□□□ 1.8
PPFIA1-203ENST00000525530 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
PPFIA1-203ENST00000525530 FOXD1Q16676 465 aa24.59■■□□□ 1.53
PPFIA1-203ENST00000525530 PLPPR3Q6T4P5 718 aa23.45■■□□□ 1.34
PPFIA1-203ENST00000525530 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
PPFIA1-203ENST00000525530 ADRA2BP18089 450 aa22.95■■□□□ 1.26
PPFIA1-203ENST00000525530 PIAS4Q8N2W9 510 aaPredicted RBP22.88■■□□□ 1.25
PPFIA1-203ENST00000525530 MSH5O43196 834 aa22.86■■□□□ 1.25
PPFIA1-203ENST00000525530 POTEDQ86YR6 584 aa22.32■■□□□ 1.16
PPFIA1-203ENST00000525530 MAPK8IP2Q13387 824 aaPredicted RBP21.09■□□□□ 0.97
PPFIA1-203ENST00000525530 DMRT2Q9Y5R5 561 aa20.91■□□□□ 0.94
PPFIA1-203ENST00000525530 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
PPFIA1-203ENST00000525530 PPP4R3CPQ6ZMV5 832 aa20.6■□□□□ 0.89
PPFIA1-203ENST00000525530 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
PPFIA1-203ENST00000525530 CNKSR2Q8WXI2 1034 aa20.17■□□□□ 0.82
PPFIA1-203ENST00000525530 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
PPFIA1-203ENST00000525530 DCAF8L1A6NGE4 600 aa19.88■□□□□ 0.77
PPFIA1-203ENST00000525530 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
PPFIA1-203ENST00000525530 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
PPFIA1-203ENST00000525530 NPM3O75607 178 aaKnown RBP19.58■□□□□ 0.72
PPFIA1-203ENST00000525530 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
PPFIA1-203ENST00000525530 DNAJC5BQ9UF47 199 aa19.46■□□□□ 0.71
PPFIA1-203ENST00000525530 KCNA4P22459 653 aa19.26■□□□□ 0.67
PPFIA1-203ENST00000525530 C1QBPQ07021 282 aaKnown RBP19.25■□□□□ 0.67
PPFIA1-203ENST00000525530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.641e-7■□□□□ 8.1
PPFIA1-203ENST00000525530 U3KPZ7 1027 aaPredicted RBP18.84■□□□□ 0.61
PPFIA1-203ENST00000525530 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
PPFIA1-203ENST00000525530 SPINK5Q9NQ38 1064 aaPredicted RBP18.54■□□□□ 0.56
PPFIA1-203ENST00000525530 DSG3P32926 999 aa18.38■□□□□ 0.53
PPFIA1-203ENST00000525530 CAPN15O75808 1086 aa18.37■□□□□ 0.53
PPFIA1-203ENST00000525530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
PPFIA1-203ENST00000525530 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
PPFIA1-203ENST00000525530 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
PPFIA1-203ENST00000525530 SLC4A1APQ9BWU0 796 aaKnown RBP18.1■□□□□ 0.49
PPFIA1-203ENST00000525530 APLP2Q06481 763 aa18.09■□□□□ 0.49
PPFIA1-203ENST00000525530 SAMD1Q6SPF0 538 aaPredicted RBP18.08■□□□□ 0.48
PPFIA1-203ENST00000525530 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
PPFIA1-203ENST00000525530 MYCNP04198 464 aaPredicted RBP18.03■□□□□ 0.48
PPFIA1-203ENST00000525530 ABCB7O75027 752 aa18.01■□□□□ 0.47
PPFIA1-203ENST00000525530 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
PPFIA1-203ENST00000525530 ZBTB22O15209 634 aa17.8■□□□□ 0.44
PPFIA1-203ENST00000525530 ATF5Q9Y2D1 282 aaPredicted RBP17.75■□□□□ 0.43
PPFIA1-203ENST00000525530 POLA2Q14181 598 aa17.68■□□□□ 0.42
PPFIA1-203ENST00000525530 POTEHQ6S545 545 aa17.45■□□□□ 0.38
PPFIA1-203ENST00000525530 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
PPFIA1-203ENST00000525530 ATXN8OSP0DMR3 200 aa17.33■□□□□ 0.36
PPFIA1-203ENST00000525530 ZBTB12Q9Y330 459 aaPredicted RBP17.22■□□□□ 0.35
PPFIA1-203ENST00000525530 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
PPFIA1-203ENST00000525530 AKT1S1Q96B36 256 aa17.08■□□□□ 0.32
PPFIA1-203ENST00000525530 CHRDL2Q6WN34 429 aa17.06■□□□□ 0.32
PPFIA1-203ENST00000525530 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
PPFIA1-203ENST00000525530 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
PPFIA1-203ENST00000525530 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
PPFIA1-203ENST00000525530 FBLN2P98095 1184 aa16.82■□□□□ 0.28
PPFIA1-203ENST00000525530 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
PPFIA1-203ENST00000525530 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
PPFIA1-203ENST00000525530 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
PPFIA1-203ENST00000525530 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
PPFIA1-203ENST00000525530 PIP4P2Q8N4L2 257 aa16.71■□□□□ 0.27
PPFIA1-203ENST00000525530 EHMT2Q96KQ7 1210 aa16.66■□□□□ 0.26
PPFIA1-203ENST00000525530 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPFIA1-203ENST00000525530 SSUH2Q9Y2M2 353 aa16.65■□□□□ 0.26
PPFIA1-203ENST00000525530 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
PPFIA1-203ENST00000525530 SPDYE1Q8NFV5 336 aaPredicted RBP16.43■□□□□ 0.22
PPFIA1-203ENST00000525530 SP7Q8TDD2 431 aaPredicted RBP16.38■□□□□ 0.21
PPFIA1-203ENST00000525530 CLEC11AQ9Y240 323 aa16.38■□□□□ 0.21
PPFIA1-203ENST00000525530 PABPN1Q86U42 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
PPFIA1-203ENST00000525530 HAX1O00165 279 aa16.29■□□□□ 0.2
PPFIA1-203ENST00000525530 PRKAR2AP13861 404 aaKnown RBP16.29■□□□□ 0.2
PPFIA1-203ENST00000525530 EVX2Q03828 476 aa16.29■□□□□ 0.2
PPFIA1-203ENST00000525530 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
PPFIA1-203ENST00000525530 PRR29P0C7W0 189 aa16.12■□□□□ 0.17
PPFIA1-203ENST00000525530 C19orf67A6NJJ6 358 aa16.11■□□□□ 0.17
PPFIA1-203ENST00000525530 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
PPFIA1-203ENST00000525530 FARP1Q9Y4F1 1045 aaPredicted RBP15.91■□□□□ 0.14
PPFIA1-203ENST00000525530 CREBZFQ9NS37 354 aa15.87■□□□□ 0.13
PPFIA1-203ENST00000525530 GABBR2O75899 941 aa15.83■□□□□ 0.12
PPFIA1-203ENST00000525530 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
PPFIA1-203ENST00000525530 PROM2Q8N271 834 aa15.8■□□□□ 0.12
PPFIA1-203ENST00000525530 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.12
PPFIA1-203ENST00000525530 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
PPFIA1-203ENST00000525530 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
PPFIA1-203ENST00000525530 ZNF579Q8NAF0 562 aaKnown RBP15.58■□□□□ 0.08
PPFIA1-203ENST00000525530 ZRANB1Q9UGI0 708 aa15.54■□□□□ 0.08
PPFIA1-203ENST00000525530 CLCN6P51797 869 aa15.5■□□□□ 0.07
PPFIA1-203ENST00000525530 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
PPFIA1-203ENST00000525530 GALR2O43603 387 aaPredicted RBP15.4■□□□□ 0.06
PPFIA1-203ENST00000525530 PHF12Q96QT6 1004 aa15.4■□□□□ 0.06
PPFIA1-203ENST00000525530 LHX8Q68G74 356 aa15.35■□□□□ 0.05
PPFIA1-203ENST00000525530 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
PPFIA1-203ENST00000525530 FKBP8Q14318 412 aa15.29■□□□□ 0.04
PPFIA1-203ENST00000525530 DCBLD2Q96PD2 775 aa15.29■□□□□ 0.04
PPFIA1-203ENST00000525530 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
PPFIA1-203ENST00000525530 MIER1Q8N108 512 aa15.22■□□□□ 0.03
PPFIA1-203ENST00000525530 MS4A3Q96HJ5 214 aa15.2■□□□□ 0.02
PPFIA1-203ENST00000525530 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
PPFIA1-203ENST00000525530 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
PPFIA1-203ENST00000525530 PELP1Q8IZL8 1130 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms