RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 FMNL3Q8IVF7 1028 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 TSTD1Q8NFU3 115 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 ENOX1Q8TC92 643 aaKnown RBP14.52□□□□□ -0.09
VARS-225ENST00000482996 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 SHC3Q92529 594 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 EDEM1Q92611 657 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 MMP17Q9ULZ9 603 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 NFE2L3Q9Y4A8 694 aa14.52□□□□□ -0.09
VARS-225ENST00000482996 AXIN1O15169 862 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 HRO43593 1189 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 LTFP02788 710 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 KLKB1P03952 638 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 CYBBP04839 570 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 TPM2P07951 284 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 TIE1P35590 1138 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 GPD2P43304 727 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 MESP2Q0VG99 397 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 TRIP4Q15650 581 aaPredicted RBP14.51□□□□□ -0.09
VARS-225ENST00000482996 TCP11X2Q5H9J9 407 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 EOGTQ5NDL2 527 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 DENND1BQ6P3S1 775 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 TRMT11Q7Z4G4 463 aaKnown RBP14.51□□□□□ -0.09
VARS-225ENST00000482996 DENND1CQ8IV53 801 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 PHTF2Q8N3S3 785 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 CCDC33Q8N5R6 958 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 TERB1Q8NA31 727 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 KCNV2Q8TDN2 545 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 STK32AQ8WU08 396 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 TRIM62Q9BVG3 475 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 MIS12Q9H081 205 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 SAMSN1Q9NSI8 373 aaKnown RBP14.51□□□□□ -0.09
VARS-225ENST00000482996 POLR3BQ9NW08 1133 aaPredicted RBP14.51□□□□□ -0.09
VARS-225ENST00000482996 ANO10Q9NW15 660 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 DNAJC12Q9UKB3 198 aa14.51□□□□□ -0.09
VARS-225ENST00000482996 AGO1Q9UL18 857 aaKnown RBP14.51□□□□□ -0.09
VARS-225ENST00000482996 BECN2A8MW95 431 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 RPP40O75818 363 aaKnown RBP14.5□□□□□ -0.09
VARS-225ENST00000482996 GABBR2O75899 941 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 ALDH1A2O94788 518 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 KLF8O95600 359 aaPredicted RBP14.5□□□□□ -0.09
VARS-225ENST00000482996 HOXC13P31276 330 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 DGKEP52429 567 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 APBA1Q02410 837 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 PTK2Q05397 1052 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 SRSF5Q13243 272 aaKnown RBP14.5□□□□□ -0.09
VARS-225ENST00000482996 LPAL2Q16609 132 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 MIIPQ5JXC2 388 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 C10orf76Q5T2E6 689 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 CCDC183Q5T5S1 534 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 MSANTD2Q6P1R3 559 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.5□□□□□ -0.09
VARS-225ENST00000482996 SFTPA1Q8IWL2 248 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 DCLK2Q8N568 766 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 ALLCQ8N6M5 410 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 GPR161Q8N6U8 529 aaKnown RBP14.5□□□□□ -0.09
VARS-225ENST00000482996 IL17RCQ8NAC3 791 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 TXNDC5Q8NBS9 432 aaKnown RBP14.5□□□□□ -0.09
VARS-225ENST00000482996 GAB3Q8WWW8 586 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 BHMTQ93088 406 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 SIX2Q9NPC8 291 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 EBF1Q9UH73 591 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 SFMBT1Q9UHJ3 866 aa14.5□□□□□ -0.09
VARS-225ENST00000482996 LATS1O95835 1130 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 RETP07949 1114 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 KIR2DL1P43626 348 aaPredicted RBP14.49□□□□□ -0.09
VARS-225ENST00000482996 RPL34P49207 117 aaKnown RBP14.49□□□□□ -0.09
VARS-225ENST00000482996 DGKGP49619 791 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 BPIFB4P59827 614 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 CRY1Q16526 586 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 STX1AQ16623 288 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 EMC10Q5UCC4 262 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 CACNA2D4Q7Z3S7 1137 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 SCUBE3Q8IX30 993 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 CPXM2Q8N436 756 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 ZNF513Q8N8E2 541 aaPredicted RBP14.49□□□□□ -0.09
VARS-225ENST00000482996 CLEC4CQ8WTT0 213 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 FAM149B1Q96BN6 582 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 NOX5Q96PH1 765 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 SLC4A5Q9BY07 1137 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 POLMQ9NP87 494 aaPredicted RBP14.49□□□□□ -0.09
VARS-225ENST00000482996 ACP6Q9NPH0 428 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 TAB2Q9NYJ8 693 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 PLK2Q9NYY3 685 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 SDK1Q7Z5N4 2213 aa14.49□□□□□ -0.09
VARS-225ENST00000482996 MYO18AQ92614 2054 aaKnown RBP14.48□□□□□ -0.09
VARS-225ENST00000482996 FOXN3O00409 490 aaPredicted RBP14.48□□□□□ -0.09
VARS-225ENST00000482996 CAPN9O14815 690 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 TRIM24O15164 1050 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 MSI1O43347 362 aaKnown RBP14.48□□□□□ -0.09
VARS-225ENST00000482996 PENKP01210 267 aaPredicted RBP14.48□□□□□ -0.09
VARS-225ENST00000482996 NCAM1P13591 858 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 KRT9P35527 623 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 SNX16P57768 344 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 ZNF445P59923 1031 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 RAPGEF1Q13905 1077 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 FYB2Q5VWT5 728 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 NUGGCQ68CJ6 796 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 SDE2Q6IQ49 451 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 ANO7Q6IWH7 933 aa14.48□□□□□ -0.09
VARS-225ENST00000482996 TMEM110Q86TL2 294 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms