RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 ZCCHC9Q8N567 271 aaKnown RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 CPT1BQ92523 772 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 TLCD1Q96CP7 247 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 QKIQ96PU8 341 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 PRMT1Q99873 361 aaKnown RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 OXCT2Q9BYC2 517 aaPredicted RBP12.62□□□□□ -0.39
PRPF39-203ENST00000477626 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 PCSK1NQ9UHG2 260 aa12.62□□□□□ -0.39
PRPF39-203ENST00000477626 MTMR11A4FU01 709 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 VAV1P15498 845 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 MAPRE1Q15691 268 aaKnown RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 RASIP1Q5U651 963 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 KRT222Q8N1A0 295 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 SNF8Q96H20 258 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 GPATCH2LQ9NWQ4 482 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 INPP5FQ9Y2H2 1132 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 PCDHB7Q9Y5E2 793 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 MUC22E2RYF6 1773 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 LRRD1A4D1F6 860 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 NRLP54845 237 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 WDR5P61964 334 aaKnown RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 GAD2Q05329 585 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 TNK2Q07912 1038 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 LLGL1Q15334 1064 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 C5orf22Q49AR2 442 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 FUT10Q6P4F1 479 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 GPR65Q8IYL9 337 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 LRRC43Q8N309 656 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 URGCPQ8TCY9 931 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 B3GALT6Q96L58 329 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 TMEM121Q9BTD3 319 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 PLVAPQ9BX97 442 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 TCRBV7S3A2A0A539 114 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 OR6C75A6NL08 312 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 GFRA2O00451 464 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 RARGP13631 454 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 SNX16P57768 344 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 DEFB103AP81534 67 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 ATP11AP98196 1134 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 HADHQ16836 314 aaKnown RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 RNF19BQ6ZMZ0 732 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 NPWQ8N729 165 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 DHRS4Q9BTZ2 278 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
PRPF39-203ENST00000477626 C11orf49Q9H6J7 331 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 MED4Q9NPJ6 270 aa12.61□□□□□ -0.39
PRPF39-203ENST00000477626 RIPK2O43353 540 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 LTFP02788 710 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 SHBGP04278 402 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 HAPLN1P10915 354 aaPredicted RBP12.6□□□□□ -0.39
PRPF39-203ENST00000477626 SNX1Q13596 522 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 ANKRD22Q5VYY1 191 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 SLC39A11Q8N1S5 342 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 HERC2P3Q9BVR0 1158 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 RRN3Q9NYV6 651 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 AP4E1Q9UPM8 1137 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 ADRA1BP35368 520 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 ITGA8P53708 1063 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 TMEM150AQ86TG1 271 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 C2orf15Q8WU43 125 aaKnown RBP12.6□□□□□ -0.39
PRPF39-203ENST00000477626 ARL8AQ96BM9 186 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 FMO2Q99518 471 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 MRPL9Q9BYD2 267 aaKnown RBP12.6□□□□□ -0.39
PRPF39-203ENST00000477626 OSBPL2Q9H1P3 480 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 C10orf88Q9H8K7 445 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 PCDH10Q9P2E7 1040 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
PRPF39-203ENST00000477626 HOXA2O43364 376 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 GOT1P17174 413 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 RPL22P35268 128 aaKnown RBP12.59□□□□□ -0.39
PRPF39-203ENST00000477626 CCL23P55773 120 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 GBE1Q04446 702 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 MSS51Q4VC12 460 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 NLRP14Q86W24 1093 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 GRK7Q8WTQ7 553 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 HSPH1Q92598 858 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 CLP1Q92989 425 aaKnown RBP12.59□□□□□ -0.39
PRPF39-203ENST00000477626 IGSF21Q96ID5 467 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 FCRL2Q96LA5 508 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-203ENST00000477626 PWWP2AQ96N64 755 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 CLSTN3Q9BQT9 956 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 DPH5Q9H2P9 285 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 MIA3Q5JRA6 1907 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 WDR27A2RRH5 827 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 WASH4PA8MWX3 477 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 IRAK2O43187 625 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 GREM1O60565 184 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 GCATO75600 419 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 TMEM63AO94886 807 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms