RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CEP295NLQ96MC4 621 aa13.4□□□□□ -0.26
UBR4-210ENST00000466969 DUSP9Q99956 384 aaKnown RBP13.4□□□□□ -0.26
UBR4-210ENST00000466969 TUFT1Q9NNX1 390 aa13.4□□□□□ -0.26
UBR4-210ENST00000466969 KMT5AQ9NQR1 393 aa13.4□□□□□ -0.26
UBR4-210ENST00000466969 EVA1BQ9NVM1 165 aa13.4□□□□□ -0.26
UBR4-210ENST00000466969 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
UBR4-210ENST00000466969 ENTPD2Q9Y5L3 495 aa13.4□□□□□ -0.26
UBR4-210ENST00000466969 PDZD2O15018 2839 aa13.4□□□□□ -0.26
UBR4-210ENST00000466969 MYH10P35580 1976 aa13.4□□□□□ -0.27
UBR4-210ENST00000466969 SPG11Q96JI7 2443 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 WIPF3A6NGB9 483 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 NOBOXO60393 691 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 DNTTP04053 509 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 CENPBP07199 599 aaPredicted RBP13.39□□□□□ -0.27
UBR4-210ENST00000466969 KRT7P08729 469 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 CISD3P0C7P0 127 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 RNF224P0DH78 156 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 SPATA31C1P0DKV0 1188 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 ACO1P21399 889 aaKnown RBP13.39□□□□□ -0.27
UBR4-210ENST00000466969 ACAT1P24752 427 aaKnown RBP13.39□□□□□ -0.27
UBR4-210ENST00000466969 MAGEA11P43364 429 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 UQCRFS1P47985 274 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 MCL1Q07820 350 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 KYAT1Q16773 422 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 JADE1Q6IE81 842 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 CATSPER3Q86XQ3 398 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 CCSER1Q9C0I3 900 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.272e-7■■■■□ 24.9
UBR4-210ENST00000466969 DDX43Q9NXZ2 648 aaKnown RBP13.39□□□□□ -0.27
UBR4-210ENST00000466969 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 HIVEP1P15822 2718 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 SVILO95425 2214 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 SCN1AP35498 2009 aa13.39□□□□□ -0.27
UBR4-210ENST00000466969 A0A1W2PR77 199 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 PMS2P1A4D2B8 440 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 KPNA7A9QM74 516 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 IRF1P10914 325 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 LIPCP11150 499 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 IFNAR1P17181 557 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 SLC5A2P31639 672 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 TXKP42681 527 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 ZNF234Q14588 700 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 CALCRLQ16602 461 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 SV2CQ496J9 727 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 TTC31Q49AM3 519 aaPredicted RBP13.38□□□□□ -0.27
UBR4-210ENST00000466969 SERPINA13PQ6UXR4 307 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 C4orf50Q6ZRC1 276 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 JAMLQ86YT9 394 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 CD302Q8IX05 232 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 OR4C6Q8NH72 309 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 HTR3CQ8WXA8 447 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 TTLL2Q9BWV7 592 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 ZNF71Q9NQZ8 489 aaPredicted RBP13.38□□□□□ -0.27
UBR4-210ENST00000466969 MARK1Q9P0L2 795 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
UBR4-210ENST00000466969 MED13LQ71F56 2210 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 SEMA7AO75326 666 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 GNLYP22749 145 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 PRKCHP24723 683 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 ARID5AQ03989 594 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 ZBTB16Q05516 673 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 TAF10Q12962 218 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 TMEM132DQ14C87 1099 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 ENOX2Q16206 610 aaKnown RBP13.37□□□□□ -0.27
UBR4-210ENST00000466969 NTRK3Q16288 839 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
UBR4-210ENST00000466969 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
UBR4-210ENST00000466969 VSTM1Q6UX27 236 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 CCDC83Q8IWF9 413 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 C9orf43Q8TAL5 461 aaPredicted RBP13.37□□□□□ -0.27
UBR4-210ENST00000466969 BHMTQ93088 406 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 DONSONQ9NYP3 566 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
UBR4-210ENST00000466969 PCDHGA7Q9Y5G6 932 aa13.37□□□□□ -0.27
UBR4-210ENST00000466969 CCDC187A0A096LP49 1063 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 COCHO43405 550 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 MAGEC1O60732 1142 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 MED24O75448 989 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 CLDN1O95832 211 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 ALPPL2P10696 532 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 TRAPPC10P48553 1259 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 NPY5RQ15761 445 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 ZPBP2Q6X784 338 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 RBM44Q6ZP01 1051 aaKnown RBP13.36□□□□□ -0.27
UBR4-210ENST00000466969 VASH2Q86V25 355 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 GANCQ8TET4 914 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 ARRDC3Q96B67 414 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 SERAC1Q96JX3 654 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 PKMYT1Q99640 499 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 NACA2Q9H009 215 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 EBF2Q9HAK2 575 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 ORC3Q9UBD5 711 aaPredicted RBP13.36□□□□□ -0.27
UBR4-210ENST00000466969 SLC27A6Q9Y2P4 619 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 KIF26BQ2KJY2 2108 aa13.36□□□□□ -0.27
UBR4-210ENST00000466969 FFAR2O15552 330 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms