RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 OVOS1Q6IE37 1185 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 C4orf22Q6V702 233 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 C4orf50Q6ZRC1 276 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 ZNF365Q70YC5 407 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 TRMT10CQ7L0Y3 403 aaKnown RBP7.2□□□□□ -1.26
RFC4-209ENST00000448497 ACTL9Q8TC94 416 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 SH3TC2Q8TF17 1288 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 FAM172AQ8WUF8 416 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 ATG4AQ8WYN0 398 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 NTAN1Q96AB6 310 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 RTP4Q96DX8 246 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 FUBP3Q96I24 572 aaKnown RBP eCLIP7.2□□□□□ -1.26
RFC4-209ENST00000448497 ZIM3Q96PE6 472 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 LPIN3Q9BQK8 851 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 PAAF1Q9BRP4 392 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 SNRNP25Q9BV90 132 aaKnown RBP7.2□□□□□ -1.26
RFC4-209ENST00000448497 HEMGNQ9BXL5 484 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 OXCT2Q9BYC2 517 aaPredicted RBP7.2□□□□□ -1.26
RFC4-209ENST00000448497 MRPL9Q9BYD2 267 aaKnown RBP7.2□□□□□ -1.26
RFC4-209ENST00000448497 ZWILCHQ9H900 591 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 POPDC2Q9HBU9 364 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 PCDH18Q9HCL0 1135 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 KRT82Q9NSB4 513 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 TBC1D13Q9NVG8 400 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 PSD3Q9NYI0 1048 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 DNPEPQ9ULA0 475 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 STAP1Q9ULZ2 295 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 USP3Q9Y6I4 520 aa7.2□□□□□ -1.26
RFC4-209ENST00000448497 SF3B1O75533 1304 aaKnown RBP eCLIP7.2□□□□□ -1.26
RFC4-209ENST00000448497 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 OR6C75A6NL08 312 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 A6NNZ2 444 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 DCDC2CA8MYV0 355 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ERVH48-1M5A8F1 160 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 CLDN5O00501 218 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 DNALI1O14645 258 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 GRAP2O75791 330 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 BEST1O76090 585 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ZBED1O96006 694 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 F9P00740 461 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 KRT14P02533 472 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 LCP1P13796 627 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ACAT1P24752 427 aaKnown RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 L1CAMP32004 1257 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 RFC2P35250 354 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 MAGEA11P43364 429 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 BRCC3P46736 316 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 HCAR3P49019 387 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 PMS2P54278 862 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 PLTPP55058 493 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 CDH6P55285 790 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 YWHAHQ04917 246 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 SMARCB1Q12824 385 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ELAVL2Q12926 359 aaKnown RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 SNX1Q13596 522 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 MRPL58Q14197 206 aaKnown RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 MORF4L2Q15014 288 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 NOMO1Q15155 1222 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 NFE2Q16621 373 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 CCDC142Q17RM4 750 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 SMTNL2Q2TAL5 461 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 TUBB8Q3ZCM7 444 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ANKRD20A8PQ5CZ79 823 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 KCNT1Q5JUK3 1230 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 SH3PXD2AQ5TCZ1 1133 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 OTUD1Q5VV17 481 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 HIBCHQ6NVY1 386 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 BHLHA9Q7RTU4 235 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 PCGF5Q86SE9 256 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 HOOK3Q86VS8 718 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ZNF280BQ86YH2 543 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 NPAS4Q8IUM7 802 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 DEFB106AQ8N104 65 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 SIX6OS1Q8N1H7 587 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 PLD5Q8N7P1 536 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 RNF169Q8NCN4 708 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 DBF4BQ8NFT6 615 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 CLEC4CQ8WTT0 213 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 MYLPFQ96A32 169 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 EXOC4Q96A65 974 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 CCDC114Q96M63 670 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 CEP295NLQ96MC4 621 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 GDAP1L1Q96MZ0 367 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 DEFB118Q96PH6 123 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 RUFY1Q96T51 708 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 TMEM175Q9BSA9 504 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 MED10Q9BTT4 135 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 MAK16Q9BXY0 300 aaKnown RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 TRIM31Q9BZY9 425 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 EPB41L4BQ9H329 900 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 PLEKHA4Q9H4M7 779 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 NGRNQ9NPE2 291 aaKnown RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 DMAP1Q9NPF5 467 aaPredicted RBP7.19□□□□□ -1.26
RFC4-209ENST00000448497 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.19□□□□□ -1.26
RFC4-209ENST00000448497 KLHL11Q9NVR0 708 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 MTMR10Q9NXD2 777 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 ASIC3Q9UHC3 531 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 PCSK1NQ9UHG2 260 aa7.19□□□□□ -1.26
RFC4-209ENST00000448497 FZD10Q9ULW2 581 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms