RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NEUROG2Q9H2A3 272 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 LRRC4Q9HBW1 653 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 KRT82Q9NSB4 513 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 GRHL1Q9NZI5 618 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 WHRNQ9P202 907 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 SNX24Q9Y343 169 aa20.09■□□□□ 0.81
LMNB1-202ENST00000395354 GOLGA6BA6NDN3 693 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 ZNF487B1APH4 448 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 LIASO43766 372 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 ARSEP51690 589 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 MRPS5P82675 430 aaKnown RBP20.08■□□□□ 0.81
LMNB1-202ENST00000395354 SMTNL2Q2TAL5 461 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 HSP90B2PQ58FF3 399 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 TPGS2Q68CL5 300 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 C4orf50Q6ZRC1 276 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 CYP4V2Q6ZWL3 525 aaPredicted RBP20.08■□□□□ 0.81
LMNB1-202ENST00000395354 RBM23Q86U06 439 aaKnown RBP20.08■□□□□ 0.81
LMNB1-202ENST00000395354 SPATA2LQ8IUW3 424 aaPredicted RBP20.08■□□□□ 0.81
LMNB1-202ENST00000395354 MAP7D3Q8IWC1 876 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 CCHCR1Q8TD31 782 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 FAM172AQ8WUF8 416 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 MYLPFQ96A32 169 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 SMARCD1Q96GM5 515 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 PEBP4Q96S96 227 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 FMO2Q99518 471 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 CSNK1G1Q9HCP0 422 aa20.08■□□□□ 0.81
LMNB1-202ENST00000395354 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.08■□□□□ 0.81
LMNB1-202ENST00000395354 TRANK1O15050 2925 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 PER2O15055 1255 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 MDM4O15151 490 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 DAB1O75553 588 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 AP1G2O75843 785 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 MATKP42679 507 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 RPL21P46778 160 aaKnown RBP20.08■□□□□ 0.8
LMNB1-202ENST00000395354 CBX1P83916 185 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 ADCY2Q08462 1091 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 ADCY1Q08828 1119 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 ADIGQ0VDE8 80 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 MTMR3Q13615 1198 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 RAB41Q5JT25 222 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 KCNT1Q5JUK3 1230 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 SH3PXD2AQ5TCZ1 1133 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 STRADAQ7RTN6 431 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 ATAD1Q8NBU5 361 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 TSEN2Q8NCE0 465 aaKnown RBP20.08■□□□□ 0.8
LMNB1-202ENST00000395354 CLEC4CQ8WTT0 213 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 NKD2Q969F2 451 aaPredicted RBP20.08■□□□□ 0.8
LMNB1-202ENST00000395354 ACSF2Q96CM8 615 aaPredicted RBP20.08■□□□□ 0.8
LMNB1-202ENST00000395354 TLE6Q9H808 572 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 LMCD1Q9NZU5 365 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 AFF4Q9UHB7 1163 aaKnown RBP20.08■□□□□ 0.8
LMNB1-202ENST00000395354 NEU2Q9Y3R4 380 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 PCDHB5Q9Y5E4 795 aa20.08■□□□□ 0.8
LMNB1-202ENST00000395354 COL4A4P53420 1690 aaPredicted RBP20.07■□□□□ 0.8
LMNB1-202ENST00000395354 MTMR11A4FU01 709 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 CLASP2O75122 1294 aaKnown RBP20.07■□□□□ 0.8
LMNB1-202ENST00000395354 BEST1O76090 585 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ATF2P15336 505 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ITIH2P19823 946 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 MAP3K7CLP57077 242 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ATP11AP98196 1134 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 BYSLQ13895 437 aaKnown RBP20.07■□□□□ 0.8
LMNB1-202ENST00000395354 GPR153Q6NV75 609 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ZDHHC24Q6UX98 284 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ADGRD2Q7Z7M1 963 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 IQCKQ8N0W5 287 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 SIX6OS1Q8N1H7 587 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 CCDC89Q8N998 374 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 BBOF1Q8ND07 529 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 FAM71BQ8TC56 605 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 C2orf15Q8WU43 125 aaKnown RBP20.07■□□□□ 0.8
LMNB1-202ENST00000395354 HSPH1Q92598 858 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ART4Q93070 314 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 CCDC114Q96M63 670 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 SMOQ99835 787 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 CNGB3Q9NQW8 809 aa20.07■□□□□ 0.8
LMNB1-202ENST00000395354 ABI2Q9NYB9 513 aaPredicted RBP20.07■□□□□ 0.8
LMNB1-202ENST00000395354 MTRF1LQ9UGC7 380 aaKnown RBP20.07■□□□□ 0.8
LMNB1-202ENST00000395354 PRRC2BQ5JSZ5 2229 aaKnown RBP20.06■□□□□ 0.8
LMNB1-202ENST00000395354 TGM5O43548 720 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 VNN2O95498 520 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 SPATA31D3P0C874 917 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 OAS2P29728 719 aaKnown RBP20.06■□□□□ 0.8
LMNB1-202ENST00000395354 VCPP55072 806 aaKnown RBP20.06■□□□□ 0.8
LMNB1-202ENST00000395354 HDAC4P56524 1084 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 YWHAZP63104 245 aaKnown RBP20.06■□□□□ 0.8
LMNB1-202ENST00000395354 CAV1Q03135 178 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 DUSP4Q13115 394 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 CALCOCO2Q13137 446 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 CDO1Q16878 200 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 CFAP58Q5T655 872 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 LILRA6Q6PI73 481 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 SPATA31D4Q6ZUB0 917 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 SCML4Q8N228 414 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 SPPL2BQ8TCT7 592 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 PPP2R3CQ969Q6 453 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
LMNB1-202ENST00000395354 PKNOX2Q96KN3 472 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 PNPLA8Q9NP80 782 aa20.06■□□□□ 0.8
LMNB1-202ENST00000395354 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms