RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 NRDE2Q9H7Z3 1164 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 ETNK2Q9NVF9 386 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 GDAP2Q9NXN4 497 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.68□□□□□ -0.38
UBR4-203ENST00000375225 BAIAP2L1Q9UHR4 511 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 HEY1Q9Y5J3 304 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 FRMPD3Q5JV73 1810 aa12.68□□□□□ -0.38
UBR4-203ENST00000375225 KBTBD13C9JR72 458 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 HUS1O60921 280 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 GCATO75600 419 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 FAM155BO75949 473 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 CABYRO75952 493 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 WFS1O76024 890 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 TGDSO95455 350 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 MYCNP04198 464 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 INHAP05111 366 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 SNRPAP09012 282 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 DARSP14868 501 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 CYP2F1P24903 491 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 GNL1P36915 607 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 ADAM17P78536 824 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 TAF5Q15542 800 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 KIZQ2M2Z5 673 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 SPRED3Q2MJR0 410 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 PARP6Q2NL67 630 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 CXCL17Q6UXB2 119 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 NPNTQ6UXI9 565 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 PDZD4Q76G19 769 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 RSPH3Q86UC2 560 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 TTC30AQ86WT1 665 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 LRRC6Q86X45 466 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 KLHDC9Q8NEP7 349 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 MRPL45Q9BRJ2 306 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 TRIM55Q9BYV6 548 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 NOD2Q9HC29 1040 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 ARHGEF3Q9NR81 526 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 ZC3H7BQ9UGR2 993 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 A0A1W2PPM1 405 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 TCRBV9S1A1TA0A576 114 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 KPNA7A9QM74 516 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 H3BRJ5 948 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 I3L4J1 428 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 M0QZ92 97 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 C2CD2LO14523 706 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 COPEO14579 308 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 TREHO43280 583 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 GRAP2O75791 330 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 IL1BP01584 269 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 ATP5BP06576 529 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 ASGR1P07306 291 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 KCNE1P15382 129 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 RBL1P28749 1068 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 HOXC8P31273 242 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 GRK4P32298 578 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 RPL34P49207 117 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 SLC18A2Q05940 514 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBR4-203ENST00000375225 NAB1Q13506 487 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 SLC1A5Q15758 541 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 KCNA10Q16322 511 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 DBN1Q16643 649 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 NBPF20Q3BBV1 942 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 MSS51Q4VC12 460 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 ATG16L1Q676U5 607 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 CYP4V2Q6ZWL3 525 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 ECHDC2Q86YB7 292 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 FITM2Q8N6M3 262 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 C12orf29Q8N999 325 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 RAB3IL1Q8TBN0 382 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 TCP10LQ8TDR4 215 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 CENPIQ92674 756 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 CFAP36Q96G28 342 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 QKIQ96PU8 341 aaKnown RBP eCLIP12.67□□□□□ -0.38
UBR4-203ENST00000375225 TMEM237Q96Q45 408 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 DHX35Q9H5Z1 703 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 MANSC1Q9H8J5 431 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 USP29Q9HBJ7 922 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 HMX1Q9NP08 348 aaPredicted RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 SAR1AQ9NR31 198 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 FAM49BQ9NUQ9 324 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 GTF2IRD1Q9UHL9 959 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 STAP1Q9ULZ2 295 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 RPL26L1Q9UNX3 145 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 AP4E1Q9UPM8 1137 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 MTO1Q9Y2Z2 717 aaKnown RBP12.67□□□□□ -0.38
UBR4-203ENST00000375225 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
UBR4-203ENST00000375225 PDCD11Q14690 1871 aaKnown RBP12.66□□□□□ -0.38
UBR4-203ENST00000375225 TCRBV7S3A2A0A539 114 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 XPO1O14980 1071 aaKnown RBP12.66□□□□□ -0.38
UBR4-203ENST00000375225 PAPSS1O43252 624 aaPredicted RBP12.66□□□□□ -0.38
UBR4-203ENST00000375225 GPR32O75388 356 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 RECQL4O94761 1208 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 APRTP07741 180 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 MLNP12872 115 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 CCND1P24385 295 aa12.66□□□□□ -0.38
UBR4-203ENST00000375225 HOXA11P31270 313 aaPredicted RBP12.66□□□□□ -0.38
UBR4-203ENST00000375225 AIF1P55008 147 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms