RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 C12orf56Q8IXR9 622 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 MRPL17Q9NRX2 175 aaKnown RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 MARCOQ9UEW3 520 aaPredicted RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 DERAQ9Y315 318 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 ZBTB39O15060 712 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 PPM1AP35813 382 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 SKOR1P84550 965 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 TBX2Q13207 712 aaPredicted RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 TP53BP2Q13625 1128 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 SLC39A12Q504Y0 691 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 LBX2Q6XYB7 198 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 TMA16Q96EY4 203 aaKnown RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 CDT1Q9H211 546 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 ANLNQ9NQW6 1124 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 WARS2Q9UGM6 360 aaKnown RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 CAPSQ13938 189 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 TRPM8Q7Z2W7 1104 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 LRRC49Q8IUZ0 686 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 FBXO25Q8TCJ0 367 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 WNT8BQ93098 351 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 SUPT7LO94864 414 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 ENO3P13929 434 aaPredicted RBP13.86□□□□□ -0.19
LDB3-202ENST00000361373 SCNN1BP51168 640 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 CDH8P55286 799 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 NOMO2Q5JPE7 1267 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 COPS5Q92905 334 aa13.86□□□□□ -0.19
LDB3-202ENST00000361373 APOC4-APOC2K7ER74 178 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 PARNO95453 639 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 IGSF6O95976 241 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 APOC2P02655 101 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 ERBB2P04626 1255 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 GRM5P41594 1212 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 NCKAP1LP55160 1127 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 HPCAP84074 193 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 CAMK2GQ13555 558 aaPredicted RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 CBWD6Q4V339 395 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 CBWD3Q5JTY5 395 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 CBWD5Q5RIA9 395 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 KATNAL2Q8IYT4 538 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SENP6Q9GZR1 1112 aaPredicted RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 PTCH2Q9Y6C5 1203 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SIGLEC16A6NMB1 481 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 MZF1P28698 734 aaPredicted RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 NAB1Q13506 487 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 LRP10Q7Z4F1 713 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SLC22A9Q8IVM8 553 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 LRRC39Q96DD0 335 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 ERP27Q96DN0 273 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SEC16BQ96JE7 1060 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 IARS2Q9NSE4 1012 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 SEPT3Q9UH03 358 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SMIM35A0A1B0GVV1 85 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 NPR3P17342 541 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 GRK3P35626 688 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 ATP5C1P36542 298 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 SCNN1GP51170 649 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 RAP1GDS1P52306 607 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 PRKAA2P54646 552 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 POLR2LP62875 67 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 RRP1BQ14684 758 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 TMEM259Q4ZIN3 620 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 KDM7AQ6ZMT4 941 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 STRA8Q7Z7C7 330 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 KIAA0319LQ8IZA0 1049 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 MTMR8Q96EF0 704 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SYNDIG1Q9H7V2 258 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 NCKIPSDQ9NZQ3 722 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 FZD1Q9UP38 647 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 AURKCQ9UQB9 309 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SIK3Q9Y2K2 1263 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 TMEM88BA6NKF7 163 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 CDK16Q00536 496 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 PPP3CAQ08209 521 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 NBPF20Q3BBV1 942 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 PARP9Q8IXQ6 854 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 PAFAH2Q99487 392 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 CDC42EP4Q9H3Q1 356 aaKnown RBP13.85□□□□□ -0.19
LDB3-202ENST00000361373 ITM2BQ9Y287 266 aa13.85□□□□□ -0.19
LDB3-202ENST00000361373 DNALI1O14645 258 aaPredicted RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 OCA2Q04671 838 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 CXorf38Q8TB03 319 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 EPS8L1Q8TE68 723 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ZNF333Q96JL9 665 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 FAM111AQ96PZ2 611 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ULBP1Q9BZM6 244 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 TM9SF1O15321 606 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ATP6V1E1P36543 226 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 TMCO4Q5TGY1 634 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ARID3BQ8IVW6 561 aaPredicted RBP13.84□□□□□ -0.19
LDB3-202ENST00000361373 CAVIN3Q969G5 261 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ZNF556Q9HAH1 456 aa13.84□□□□□ -0.19
LDB3-202ENST00000361373 ADGRA2Q96PE1 1338 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms