RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 AXIN1O15169 862 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 RPP40O75818 363 aaKnown RBP16.8■□□□□ 0.28
ATG4B-201ENST00000344376 LTFP02788 710 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 KLKB1P03952 638 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 CYBBP04839 570 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 TPM2P07951 284 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 GPD2P43304 727 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 DGKEP52429 567 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 EOGTQ5NDL2 527 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 DENND1CQ8IV53 801 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 CCDC33Q8N5R6 958 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 GPR161Q8N6U8 529 aaKnown RBP16.8■□□□□ 0.28
ATG4B-201ENST00000344376 ENOX1Q8TC92 643 aaKnown RBP16.8■□□□□ 0.28
ATG4B-201ENST00000344376 KCNV2Q8TDN2 545 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 GAB3Q8WWW8 586 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 ZNF606Q8WXB4 792 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 SHC3Q92529 594 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 MIS12Q9H081 205 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 POLR3BQ9NW08 1133 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-201ENST00000344376 DNAJC12Q9UKB3 198 aa16.8■□□□□ 0.28
ATG4B-201ENST00000344376 AGO1Q9UL18 857 aaKnown RBP16.8■□□□□ 0.28
ATG4B-201ENST00000344376 FAM186AA6NE01 2351 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 ALDH1A2O94788 518 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 KLF8O95600 359 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-201ENST00000344376 DGKGP49619 791 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 APBA1Q02410 837 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 PTK2Q05397 1052 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 MESP2Q0VG99 397 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 SRSF5Q13243 272 aaKnown RBP16.79■□□□□ 0.28
ATG4B-201ENST00000344376 TRIP4Q15650 581 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-201ENST00000344376 LPAL2Q16609 132 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 TCP11X2Q5H9J9 407 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 MIIPQ5JXC2 388 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 DENND1BQ6P3S1 775 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 TXNDC5Q8NBS9 432 aaKnown RBP16.79■□□□□ 0.28
ATG4B-201ENST00000344376 STK32AQ8WU08 396 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 BHMTQ93088 406 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 SAMSN1Q9NSI8 373 aaKnown RBP16.79■□□□□ 0.28
ATG4B-201ENST00000344376 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 EBF1Q9UH73 591 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 SFMBT1Q9UHJ3 866 aa16.79■□□□□ 0.28
ATG4B-201ENST00000344376 BECN2A8MW95 431 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 HOXC13P31276 330 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 KIR2DL1P43626 348 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-201ENST00000344376 MSANTD2Q6P1R3 559 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 SFTPA1Q8IWL2 248 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 KIAA2013Q8IYS2 634 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 CPXM2Q8N436 756 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 DCLK2Q8N568 766 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 ZNF513Q8N8E2 541 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-201ENST00000344376 IL17RCQ8NAC3 791 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 FAM149B1Q96BN6 582 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 POLMQ9NP87 494 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-201ENST00000344376 SIX2Q9NPC8 291 aa16.78■□□□□ 0.28
ATG4B-201ENST00000344376 PTPRZ1P23471 2315 aaPredicted RBP16.78■□□□□ 0.28
ATG4B-201ENST00000344376 GABBR2O75899 941 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 LATS1O95835 1130 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 PENKP01210 267 aaPredicted RBP16.77■□□□□ 0.28
ATG4B-201ENST00000344376 RETP07949 1114 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 RPL34P49207 117 aaKnown RBP16.77■□□□□ 0.28
ATG4B-201ENST00000344376 ZNF445P59923 1031 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 CRY1Q16526 586 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 STX1AQ16623 288 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 CACNA2D4Q7Z3S7 1137 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 CLEC4CQ8WTT0 213 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 NOX5Q96PH1 765 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 SLC4A5Q9BY07 1137 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 ACP6Q9NPH0 428 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 PLK2Q9NYY3 685 aa16.77■□□□□ 0.28
ATG4B-201ENST00000344376 MSI1O43347 362 aaKnown RBP16.77■□□□□ 0.27
ATG4B-201ENST00000344376 NCAM1P13591 858 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 BPIFB4P59827 614 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 PDCLQ13371 301 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 EMC10Q5UCC4 262 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 FYB2Q5VWT5 728 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 NUGGCQ68CJ6 796 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 SDE2Q6IQ49 451 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 ANO7Q6IWH7 933 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 UNC45BQ8IWX7 931 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 SCUBE3Q8IX30 993 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 ANKRD20A12PQ8NF67 263 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 DDI1Q8WTU0 396 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 SERPINB11Q96P15 392 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 STARD13Q9Y3M8 1113 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 CEP83Q9Y592 693 aa16.77■□□□□ 0.27
ATG4B-201ENST00000344376 KIAA1549LQ6ZVL6 1849 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 GVINP1Q7Z2Y8 2422 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 SGK1O00141 431 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 CAPN9O14815 690 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 TRIM24O15164 1050 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 KRT9P35527 623 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 SNX16P57768 344 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 MPPE1Q53F39 396 aa16.76■□□□□ 0.27
ATG4B-201ENST00000344376 USP39Q53GS9 565 aaKnown RBP16.76■□□□□ 0.27
ATG4B-201ENST00000344376 C11orf74Q86VG3 221 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms