RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ASB15Q8WXK1 588 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TUBGCP2Q9BSJ2 902 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MXD3Q9BW11 206 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 VPS11Q9H270 941 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MUC13Q9H3R2 512 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CASS4Q9NQ75 786 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GPATCH8Q9UKJ3 1502 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PDHBP11177 359 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 METAP2P50579 478 aaKnown RBP eCLIP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 VSNL1P62760 191 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 IFIT5Q13325 482 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SLC39A14Q15043 492 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GPRC6AQ5T6X5 926 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 EFL1Q7Z2Z2 1120 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 COMTD1Q86VU5 262 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SLC13A3Q8WWT9 602 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MRPL47Q9HD33 250 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ACSL5Q9ULC5 683 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ARID1AO14497 2285 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZBTB43O43298 467 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CSN2P05814 226 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 HSMCR30P0CW71 290 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CSF2RAP15509 400 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PDGFRAP16234 1089 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ARSHQ5FYA8 562 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ANKS6Q68DC2 871 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CYFIP1Q7L576 1253 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CHAC2Q8WUX2 184 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SEC14L1Q92503 715 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 C18orf25Q96B23 403 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LURAP1Q96LR2 239 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 AVENQ9NQS1 362 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SNX6Q9UNH7 406 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 HEATR1Q9H583 2144 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 AIM2O14862 343 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 EIF2DP41214 584 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PDE4DQ08499 809 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LHFPL5Q8TAF8 219 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ANKS1AQ92625 1134 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MAGEB10Q96LZ2 347 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RNF32Q9H0A6 362 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 QRSL1Q9H0R6 528 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LMAN2LQ9H0V9 348 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TPK1Q9H3S4 243 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 KLHL42Q9P2K6 505 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZHX2Q9Y6X8 837 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 IRGMA1A4Y4 181 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 INPPL1O15357 1258 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 PLEKHA8P1O95397 391 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 HOXB7P09629 217 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 DEFA6Q01524 100 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 DEF8Q6ZN54 512 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC8DQ7L1W4 858 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RETREG3Q86VR2 466 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 LRRC47Q8N1G4 583 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 AGAP11Q8TF27 550 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 GAB3Q8WWW8 586 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 METTL2AQ96IZ6 378 aaKnown RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 TJP2Q9UDY2 1190 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF213O14771 459 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RIPK2O43353 540 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 RGS19P49795 217 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 ITGADQ13349 1161 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 CHMP7Q8WUX9 453 aaPredicted RBP3.87□□□□□ -1.79
SYNE2-202ENST00000344113 MAN1B1Q9UKM7 699 aa3.87□□□□□ -1.79
SYNE2-202ENST00000344113 SRGAP2O75044 1071 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ITGA2P17301 1181 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PTK7Q13308 1070 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 QPRTQ15274 297 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ASRGL1Q7L266 308 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GFOD1Q9NXC2 390 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 RAD54BQ9Y620 910 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SPAG17Q6Q759 2223 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 MICAL3Q7RTP6 2002 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CLDN25C9JDP6 229 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TPST1O60507 370 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 IFIT1P09914 478 aaKnown RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 THRAP10827 490 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ARHGAP17Q68EM7 881 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 LINC00469Q8N7U9 141 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 NDUFAF4Q9P032 175 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PNMA8BQ9ULN7 279 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 G3V3G9 751 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 EIF3FO00303 357 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 FAM163BP0C2L3 166 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF792Q3KQV3 632 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PTPN20Q4JDL3 420 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DCAF8Q5TAQ9 597 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 TMC4Q7Z404 712 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 OR10Z1Q8NGY1 313 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GPN1Q9HCN4 374 aaPredicted RBP3.86□□□□□ -1.79
SYNE2-202ENST00000344113 GRIP1Q9Y3R0 1128 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 IFT140Q96RY7 1462 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 EXOC1LA0A1B0GW35 172 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 LOC110117498-PIK3R3F6TDL0 507 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 DGAT1O75907 488 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 SULT1E1P49888 294 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 PKP1Q13835 747 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 VWA5B1Q5TIE3 1220 aa3.86□□□□□ -1.79
SYNE2-202ENST00000344113 CENPPQ6IPU0 288 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms