RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 NCANO14594 1321 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 C15orf38-AP3S2A0A0A6YYH1 394 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 A0A0U1RQJ8 604 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 ANXA9O76027 345 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 IL18RAPO95256 599 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 RXRGP48443 463 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 GALK1P51570 392 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 GTF2H3Q13889 308 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 TMEM26Q6ZUK4 368 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 ARPINQ7Z6K5 226 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 SNX32Q86XE0 403 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 SULF1Q8IWU6 871 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 ARL10Q8N8L6 244 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 QKIQ96PU8 341 aaKnown RBP eCLIP9.17□□□□□ -0.941e-26■■■■□ 23.1
VCL-206ENST00000623461 OSBPL6Q9BZF3 934 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 AVENQ9NQS1 362 aaPredicted RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.17□□□□□ -0.94
VCL-206ENST00000623461 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.17□□□□□ -0.946e-11■■■□□ 18.8
VCL-206ENST00000623461 CHORDC1Q9UHD1 332 aaPredicted RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 AP4B1Q9Y6B7 739 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 CLTCQ00610 1675 aaKnown RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 F5H6K3 240 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 GSC2O15499 205 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 TRMUO75648 421 aaKnown RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 CSF1RP07333 972 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 IL12AP29459 219 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 MMP14P50281 582 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 KLRC3Q07444 240 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 CACHD1Q5VU97 1274 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 ZNF560Q96MR9 790 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 RIT2Q99578 217 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 SLC25A23Q9BV35 468 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 CRNNQ9UBG3 495 aaPredicted RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 MAGEB16A2A368 324 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 MAGEC1O60732 1142 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 NDUFS3O75489 264 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 GH2P01242 217 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 LCP1P13796 627 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 PBX1P40424 430 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 FASTKQ14296 549 aaKnown RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 POLD3Q15054 466 aaPredicted RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 ATPAF2Q8N5M1 289 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 POU5F2Q8N7G0 328 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 MOV10Q9HCE1 1003 aaKnown RBP9.17□□□□□ -0.94
VCL-206ENST00000623461 ZNF180Q9UJW8 692 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 AP3M1Q9Y2T2 418 aa9.17□□□□□ -0.94
VCL-206ENST00000623461 ZNF263O14978 683 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 CYP2C8P10632 490 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 RARBP10826 455 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 TALDO1P37837 337 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 TRIM71Q2Q1W2 868 aaKnown RBP9.16□□□□□ -0.94
VCL-206ENST00000623461 PPP4R4Q6NUP7 873 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 SIX5Q8N196 739 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 TMC2Q8TDI7 906 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 SLC5A5Q92911 643 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 OSBPL7Q9BZF2 842 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 S100A14Q9HCY8 104 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 FBXO28Q9NVF7 368 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 PIK3R1P27986 724 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ITGA1P56199 1179 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 C1QBPQ07021 282 aaKnown RBP9.16□□□□□ -0.94
VCL-206ENST00000623461 LMBRD2Q68DH5 695 aaPredicted RBP9.16□□□□□ -0.94
VCL-206ENST00000623461 SFRP1Q8N474 314 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 BTBD9Q96Q07 612 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 WDR41Q9HAD4 459 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 VPS9D1Q9Y2B5 631 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 SNPHO15079 494 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 VPS4BO75351 444 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 SUPT7LO94864 414 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ADORA2BP29275 332 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 CCT8P50990 548 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 PSMC6P62333 389 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 RBP5P82980 135 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 BFSP2Q13515 415 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 GIT2Q14161 759 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 TTC23Q5W5X9 447 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 SYTL1Q8IYJ3 562 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 PIWIL2Q8TC59 973 aaKnown RBP9.16□□□□□ -0.94
VCL-206ENST00000623461 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 TMEM109Q9BVC6 243 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 KLHL31Q9H511 634 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 LRRC19Q9H756 370 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ENOPH1Q9UHY7 261 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 MRASO14807 208 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 MZT2BQ6NZ67 158 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 GANQ9H2C0 597 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 GIN1Q9NXP7 522 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 GMEB1Q9Y692 573 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 BIRC5O15392 142 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 DCXO43602 365 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ASNSP08243 561 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ELK3P41970 407 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 SLC15A2Q16348 729 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 AARS2Q5JTZ9 985 aaKnown RBP9.16□□□□□ -0.94
VCL-206ENST00000623461 KLHL17Q6TDP4 642 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 STRA8Q7Z7C7 330 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 AMER2Q8N7J2 671 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ZCWPW1Q9H0M4 648 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
VCL-206ENST00000623461 ANKEF1Q9NU02 776 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms