RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 GPRIN1Q7Z2K8 1008 aa18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 SCUBE3Q8IX30 993 aa18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 SMG7Q92540 1137 aaKnown RBP18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 KRT35Q92764 455 aa18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 CNPY3Q9BT09 278 aa18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 CNGB3Q9NQW8 809 aa18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 USTQ9Y2C2 406 aa18.64■□□□□ 0.58
RBFOX1-222ENST00000585867 C2CD4BA6NLJ0 364 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 HSF2BPO75031 334 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 POU2F2P09086 479 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 SSR1P43307 286 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 USP46P62068 366 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 OGDHQ02218 1023 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 RAB41Q5JT25 222 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 POLNQ7Z5Q5 900 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 SCAMP5Q8TAC9 235 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 ALG3Q92685 438 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 MSLNLQ96KJ4 702 aa18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 DDX56Q9NY93 547 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 DNMT3BQ9UBC3 853 aaKnown RBP18.64■□□□□ 0.57
RBFOX1-222ENST00000585867 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 GABBR2O75899 941 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 PAPLNO95428 1278 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 PDGFRAP16234 1089 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 HMGA1P17096 107 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 SDC4P31431 198 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 CETN2P41208 172 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 TKTL1P51854 596 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 RNASE9P60153 205 aaKnown RBP18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 CCDC70Q6NSX1 233 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 GPR149Q86SP6 731 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 KATNAL2Q8IYT4 538 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 HS6ST3Q8IZP7 471 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 SCML4Q8N228 414 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 EMC1Q8N766 993 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 RXFP2Q8WXD0 754 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 MS4A14Q96JA4 679 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 CORO1BQ9BR76 489 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 TRIM62Q9BVG3 475 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 S1PR5Q9H228 398 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 HCFC1R1Q9NWW0 138 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 COMMD8Q9NX08 183 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 EHD2Q9NZN4 543 aa18.63■□□□□ 0.57
RBFOX1-222ENST00000585867 PDE2AO00408 941 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 KRT7P08729 469 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 YWHAQP27348 245 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 PCK1P35558 622 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 MRPS5P82675 430 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 ODF2Q5BJF6 829 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 DCAF12L1Q5VU92 463 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 CES5AQ6NT32 575 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 GRASPQ7Z6J2 395 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 SPATA4Q8NEY3 305 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 MAFAQ8NHW3 353 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 IRGQQ8WZA9 623 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 HLA-CQ95604 372 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 MYRFLQ96LU7 910 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 TTLL2Q9BWV7 592 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 LRRC3Q9BY71 257 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 ADAM7Q9H2U9 754 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 FBXO44Q9H4M3 255 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 UBE2ZQ9H832 354 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 ZNF334Q9HCZ1 680 aaPredicted RBP18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 IL37Q9NZH6 218 aa18.62■□□□□ 0.57
RBFOX1-222ENST00000585867 H3BQ06 376 aaPredicted RBP18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 DAB1O75553 588 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 MYL4P12829 197 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 KCNA5P22460 613 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 PTPN9P43378 593 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 MARCKSL1P49006 195 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 LRRN4CLQ8ND94 238 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 TRMT2BQ96GJ1 504 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 RBM41Q96IZ5 413 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 PIWIL1Q96J94 861 aaKnown RBP18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 ASAH2Q9NR71 780 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 UXTQ9UBK9 157 aaPredicted RBP18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 CD207Q9UJ71 328 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 USP3Q9Y6I4 520 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 GREB1Q4ZG55 1949 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 SZT2Q5T011 3432 aa18.61■□□□□ 0.57
RBFOX1-222ENST00000585867 GOLGA6L10A0A0M3HER8 536 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 CCDC188H7C350 402 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 RHOP08100 348 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 USP17L7P0C7H9 530 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 TAS2R40P59535 323 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 NTHL1P78549 312 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 TAF10Q12962 218 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 LONRF2Q1L5Z9 754 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 ATAT1Q5SQI0 421 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 CPNE8Q86YQ8 564 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 EXD1Q8NHP7 514 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 MAIP1Q8WWC4 291 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 FAM149B1Q96BN6 582 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 ULBP1Q9BZM6 244 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 CDH22Q9UJ99 828 aa18.6■□□□□ 0.57
RBFOX1-222ENST00000585867 FAM92AA1XBS5 289 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms