RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 Q6ZNB5 142 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 CCDC186Q7Z3E2 898 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 ZC3H3Q8IXZ2 948 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 TMEFF1Q8IYR6 380 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 PGBD3Q8N328 593 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 SLC6A17Q9H1V8 727 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 VPS45Q9NRW7 570 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 RMND1Q9NWS8 449 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 DNMT3LQ9UJW3 386 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 RAD54BQ9Y620 910 aa11.7□□□□□ -0.54
PPP4R1-218ENST00000580745 ATXN2Q99700 1313 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 A0A1W2PQF6 199 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 C4orf47A7E2U8 309 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 WASH3PC4AMC7 463 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 ALDH1A2O94788 518 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 CISD3P0C7P0 127 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 GABRG2P18507 467 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 TRIM21P19474 475 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 P2RY2P41231 377 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 LIMK1P53667 647 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 PDE4CQ08493 712 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 CUL2Q13617 745 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 RNF43Q68DV7 783 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 ARHGAP17Q68EM7 881 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 KIAA1211LQ6NV74 962 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 SPATA20Q8TB22 786 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 UBA3Q8TBC4 463 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 PIGKQ92643 395 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 KAT5Q92993 513 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 SMARCE1Q969G3 411 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 SLC35C1Q96A29 364 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 TSG101Q99816 390 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 EDEM2Q9BV94 578 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 ULBP1Q9BZM6 244 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 POLMQ9NP87 494 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 CD93Q9NPY3 652 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 FSCN3Q9NQT6 498 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 TMEM74BQ9NUR3 256 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 CACNA2D2Q9NY47 1150 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 MARK1Q9P0L2 795 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 LSM7Q9UK45 103 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 MAN1B1Q9UKM7 699 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 CLEC4EQ9ULY5 219 aa11.69□□□□□ -0.54
PPP4R1-218ENST00000580745 SLC12A8A0AV02 714 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 LNP1A1A4G5 178 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 PIK3R2O00459 728 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 SLC16A3O15427 465 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 MAP3K13O43283 966 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CACNG3O60359 315 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 FOXD2O60548 495 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 GADD45BO75293 160 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 SMC2O95347 1197 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 RALAP11233 206 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 HOXB2P14652 356 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CD19P15391 556 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 BMP6P22004 513 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CORO1AP31146 461 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 TKTL1P51854 596 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 YWHAGP61981 247 aaKnown RBP eCLIP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 IRX4P78413 519 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 FKBP3Q00688 224 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 HSF5Q4G112 596 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 COBLL1Q53SF7 1204 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 RAB41Q5JT25 222 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 KLHL10Q6JEL2 608 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 KLHDC10Q6PID8 442 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 BHLHA9Q7RTU4 235 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CYP2U1Q7Z449 544 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 DENND1CQ8IV53 801 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CHPFQ8IZ52 775 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 UBR7Q8N806 425 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 GSDMAQ96QA5 445 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 XPO6Q96QU8 1125 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CD248Q9HCU0 757 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CLIC5Q9NZA1 410 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 CALCOCO1Q9P1Z2 691 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 WDR35Q9P2L0 1181 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 ARMCX3Q9UH62 379 aaPredicted RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 AGO1Q9UL18 857 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 COQ4Q9Y3A0 265 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 PTPRDP23468 1912 aa11.68□□□□□ -0.54
PPP4R1-218ENST00000580745 DENND4CQ5VZ89 1909 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 ANAPC1Q9H1A4 1944 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 BIN1O00499 593 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 GIPC1O14908 333 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 STX10O60499 249 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 GABBR2O75899 941 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 NDUFV2P19404 249 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 NTSR1P30989 418 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 DGKGP49619 791 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 NUCB2P80303 420 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 GOLGA8FQ08AF8 430 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 GOLGA8DPQ0D2H9 430 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 ADIGQ0VDE8 80 aa11.67□□□□□ -0.54
PPP4R1-218ENST00000580745 GEN1Q17RS7 908 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms