RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 YJEFN3A6XGL0 299 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 E7ENQ6 273 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 STC2O76061 302 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 APODP05090 189 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 EEF1GP26641 437 aaKnown RBP20.24■□□□□ 0.83
CCDC113-204ENST00000566498 SEC13P55735 322 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 C2orf27AQ580R0 203 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 PKN3Q6P5Z2 889 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 ZBTB44Q8NCP5 570 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 RPLP0P6Q8NHW5 317 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 GOLGA1Q92805 767 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 ACP6Q9NPH0 428 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 ABCC13Q9NSE7 274 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 OLA1Q9NTK5 396 aaKnown RBP20.24■□□□□ 0.83
CCDC113-204ENST00000566498 VPS13AQ96RL7 3174 aa20.24■□□□□ 0.83
CCDC113-204ENST00000566498 CHURC1-FNTBB4DL54 471 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 GREM1O60565 184 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 TPM2P07951 284 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 FNTBP49356 437 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 DAOAP59103 153 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 DENND1BQ6P3S1 775 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 SCUBE3Q8IX30 993 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 EZH1Q92800 747 aaPredicted RBP20.23■□□□□ 0.83
CCDC113-204ENST00000566498 NELL1Q92832 810 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 BBS2Q9BXC9 721 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 DCLK3Q9C098 648 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 VPS16Q9H269 839 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 ARHGEF4Q9NR80 690 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 TAB2Q9NYJ8 693 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 WDR35Q9P2L0 1181 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 DEC1Q9P2X7 70 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 ZNF510Q9Y2H8 683 aa20.23■□□□□ 0.83
CCDC113-204ENST00000566498 BECN2A8MW95 431 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.22■□□□□ 0.83
CCDC113-204ENST00000566498 NEDD8-MDP1E9PL57 170 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 K7EQS6 105 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 K7ESF4 209 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 GABBR2O75899 941 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 KAT7O95251 611 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 TDGF1P13385 188 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 EIF2DP41214 584 aaKnown RBP20.22■□□□□ 0.83
CCDC113-204ENST00000566498 GRIA2P42262 883 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 GPD2P43304 727 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 PTK2Q05397 1052 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 KDSRQ06136 332 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 STX1AQ16623 288 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 PREPLQ4J6C6 727 aaPredicted RBP20.22■□□□□ 0.83
CCDC113-204ENST00000566498 NUDT18Q6ZVK8 323 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 BHLHA9Q7RTU4 235 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 C12orf40Q86WS4 652 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 DENND1CQ8IV53 801 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 FMNL3Q8IVF7 1028 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 IRGQQ8WZA9 623 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 SHC3Q92529 594 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 SIX2Q9NPC8 291 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 POLR3BQ9NW08 1133 aaPredicted RBP20.22■□□□□ 0.83
CCDC113-204ENST00000566498 FANCLQ9NW38 375 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 SFMBT1Q9UHJ3 866 aa20.22■□□□□ 0.83
CCDC113-204ENST00000566498 MYO15AQ9UKN7 3530 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 TBC1D3BA6NDS4 549 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 FOXN3O00409 490 aaPredicted RBP20.21■□□□□ 0.83
CCDC113-204ENST00000566498 HOXC11O43248 304 aaPredicted RBP20.21■□□□□ 0.83
CCDC113-204ENST00000566498 FBXO21O94952 628 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 PAPSS2O95340 614 aaPredicted RBP20.21■□□□□ 0.83
CCDC113-204ENST00000566498 KLKB1P03952 638 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 CORO1AP31146 461 aaKnown RBP20.21■□□□□ 0.83
CCDC113-204ENST00000566498 DMWDQ09019 674 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 KCNMA1Q12791 1236 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 SCML4Q8N228 414 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 CLEC4CQ8WTT0 213 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 BHMTQ93088 406 aa20.21■□□□□ 0.83
CCDC113-204ENST00000566498 XPO6Q96QU8 1125 aaKnown RBP20.21■□□□□ 0.83
CCDC113-204ENST00000566498 USP34Q70CQ2 3546 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 TULP3O75386 442 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 TYRP14679 529 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 CDK11BP21127 795 aaKnown RBP20.2■□□□□ 0.82
CCDC113-204ENST00000566498 HOXC13P31276 330 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 CHKAP35790 457 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 ACADSBP45954 432 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 PXNP49023 591 aaPredicted RBP20.2■□□□□ 0.82
CCDC113-204ENST00000566498 HARS2P49590 506 aaKnown RBP20.2■□□□□ 0.82
CCDC113-204ENST00000566498 RAPGEF1Q13905 1077 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 Q6ZNB5 142 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 C11orf57Q6ZUT1 292 aaPredicted RBP20.2■□□□□ 0.82
CCDC113-204ENST00000566498 LONP2Q86WA8 852 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 SFTPA1Q8IWL2 248 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 CCDC33Q8N5R6 958 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 USP33Q8TEY7 942 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 HINFPQ9BQA5 517 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 AJAP1Q9UKB5 411 aaPredicted RBP20.2■□□□□ 0.82
CCDC113-204ENST00000566498 PIEZO1Q92508 2521 aa20.2■□□□□ 0.82
CCDC113-204ENST00000566498 FANCMQ8IYD8 2048 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 A0A0A0MRY4 1105 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 LILRB5O75023 590 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 LTFP02788 710 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 KRT9P35527 623 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 TIE1P35590 1138 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 TNFRSF4P43489 277 aa20.19■□□□□ 0.82
CCDC113-204ENST00000566498 MRPS21P82921 87 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms