RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 RRN3Q9NYV6 651 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 C15orf38-AP3S2A0A0A6YYH1 394 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM220BPB1ANY3 271 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ATP9AO75110 1047 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ATP6V1G2O95670 118 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 VCLP18206 1134 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 SREBF1P36956 1147 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 CSE1LP55060 971 aaKnown RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 PLIN5Q00G26 463 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRAF2Q12933 501 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ARPINQ7Z6K5 226 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 RMND5BQ96G75 393 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 CYP4F12Q9HCS2 524 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 PDGFCQ9NRA1 345 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 THAP1Q9NVV9 213 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 CROTQ9UKG9 612 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 DSEQ9UL01 958 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ABCC3O15438 1527 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC37A4O43826 429 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRIM13O60858 407 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 B3GAT3O94766 335 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 DDHD2O94830 711 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 CAMTA2O94983 1202 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 GSTM1P09488 218 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 HOXB8P17481 243 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 DNAJB2P25686 324 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 NPTX2P47972 431 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC26A2P50443 739 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 HERVK_113P62684 666 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 MTA1Q13330 715 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC9A5Q14940 896 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 RSBN1Q5VWQ0 802 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ACOT1Q86TX2 421 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 WDR49Q8IV35 697 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 OR8H2Q8N162 312 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 FAM45AQ8TCE6 357 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TRIM63Q969Q1 353 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ATG4CQ96DT6 458 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZBTB10Q96DT7 871 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 VCPIP1Q96JH7 1222 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 KCTD14Q9BQ13 255 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 TMEM121Q9BTD3 319 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ACTR8Q9H981 624 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 AAASQ9NRG9 546 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 KPNA4O00629 521 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 MED24O75448 989 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 NMD3Q96D46 503 aaKnown RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 BTBD10Q9BSF8 475 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 PACSIN1Q9BY11 444 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 STN1Q9H668 368 aaKnown RBP13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZFYVE28Q9HCC9 887 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 AHSPQ9NZD4 102 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 ARHGAP20Q9P2F6 1191 aa13.57□□□□□ -0.24
CSPG4P11-201ENST00000560634 CRB1P82279 1406 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 TNS3Q68CZ2 1445 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 LDLRP01130 860 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 KPNA1P52294 538 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 NR6A1Q15406 480 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 INAQ16352 499 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CCDC149Q6ZUS6 474 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZNF720Q7Z2F6 126 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 ZNF571Q7Z3V5 609 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 SLC20A1Q8WUM9 679 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 MTMR12Q9C0I1 747 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 FANCEQ9HB96 536 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 RABGEF1Q9UJ41 708 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 MROH7Q68CQ1 1323 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 GNG14A0A1W2PPG7 69 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 RPS12P25398 132 aaKnown RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CD151P48509 253 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CDK7P50613 346 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 ITGA1P56199 1179 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 IL5RAQ01344 420 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 PTPN11Q06124 597 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 SNX30Q5VWJ9 437 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CDK20Q8IZL9 346 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 MRPS31Q92665 395 aaKnown RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CEP44Q9C0F1 390 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 SEMA4AQ9H3S1 761 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 NRDE2Q9H7Z3 1164 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 TMEM51Q9NW97 253 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 UTP6Q9NYH9 597 aaKnown RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 ITGB1BP2Q9UKP3 347 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 TPRKBQ9Y3C4 175 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 H3BMM5 538 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 GPR182O15218 404 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CLOCKO15516 846 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 SNUPNO95149 360 aaKnown RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 LRG1P02750 347 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 LHX1P48742 406 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CSHL1Q14406 222 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 NFE2Q16621 373 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 RXFP2Q8WXD0 754 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 FBXO32Q969P5 355 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 TMEM169Q96HH4 297 aa13.56□□□□□ -0.24
CSPG4P11-201ENST00000560634 CBWD1Q9BRT8 395 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms