RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 DHRS4Q9BTZ2 278 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PLA2G4CQ9UP65 541 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 TTLL3Q9Y4R7 772 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 TEX264Q9Y6I9 313 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PAPPA2Q9BXP8 1791 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 NEMP1O14524 444 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 ADCY6O43306 1168 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 RFPL1O75677 317 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 RTN3O95197 1032 aaPredicted RBP12.79□□□□□ -0.36
LDLR-205ENST00000557933 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
LDLR-205ENST00000557933 PSAPP07602 524 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 DHRS4L1P0CG22 281 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 CXCL8P10145 99 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 TCN1P20061 433 aaPredicted RBP12.79□□□□□ -0.36
LDLR-205ENST00000557933 SAT1P21673 171 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 ARRB2P32121 409 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 OR6B2Q6IFH4 312 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 TRIM72Q6ZMU5 477 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 SH2D5Q6ZV89 423 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 BBS12Q6ZW61 710 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 TMPRSS6Q8IU80 811 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 RNF149Q8NC42 400 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 MARK4Q96L34 752 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 MIS12Q9H081 205 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 CNTN3Q9P232 1028 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PLLPQ9Y342 182 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 PSAT1Q9Y617 370 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 SLC4A7Q9Y6M7 1214 aa12.79□□□□□ -0.36
LDLR-205ENST00000557933 CAPN14A8MX76 684 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 ZC3H11AO75152 810 aaKnown RBP eCLIP12.78□□□□□ -0.36
LDLR-205ENST00000557933 METTL18O95568 372 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 SFNP31947 248 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 CCR10P46092 362 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 KRT81Q14533 505 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 VSIG10LQ86VR7 867 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 SLC26A11Q86WA9 606 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 CRLF3Q8IUI8 442 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 AZIN2Q96A70 460 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 SYT17Q9BSW7 474 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 B3GNT5Q9BYG0 378 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 SDCBP2Q9H190 292 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 FAM49BQ9NUQ9 324 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 PGAP2Q9UHJ9 254 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 APPL1Q9UKG1 709 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 HBS1LQ9Y450 684 aaKnown RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 SCN4AP35499 1836 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 GOLGA8TH3BQL2 631 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 INO80B-WBP1J3KQ70 363 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 DCXO43602 365 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 HCRTO43612 131 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 AMHR2Q16671 573 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 HADHQ16836 314 aaKnown RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 IL31Q6EBC2 164 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 UNC5AQ6ZN44 842 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 CMC1Q7Z7K0 106 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 CAND1Q86VP6 1230 aaKnown RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 DEFB107AQ8IZN7 70 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 GPC2Q8N158 579 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 GORASP1Q9BQQ3 440 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 ADPGKQ9BRR6 497 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 INO80BQ9C086 356 aaPredicted RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 NIF3L1Q9GZT8 377 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 A0A088AWK7 358 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 A0A1B0GTW7 788 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 USP12O75317 370 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 TM7SF2O76062 418 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 ZBED1O96006 694 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 PDGFRAP16234 1089 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 AP2B1P63010 937 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 IGBP1P78318 339 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 GBE1Q04446 702 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 STX3Q13277 289 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 CUL3Q13618 768 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 DRICH1Q6PGQ1 229 aaPredicted RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 MFN1Q8IWA4 741 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 DEPDC1BQ8WUY9 529 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 XAB2Q9HCS7 855 aaKnown RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 TAGLN3Q9UI15 199 aa12.78□□□□□ -0.36
LDLR-205ENST00000557933 HEMK1Q9Y5R4 338 aaPredicted RBP12.78□□□□□ -0.36
LDLR-205ENST00000557933 CFLARO15519 480 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 KRT37O76014 449 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 AMHP03971 560 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.36
LDLR-205ENST00000557933 RAG1P15918 1043 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 TBXAS1P24557 533 aaPredicted RBP12.77□□□□□ -0.36
LDLR-205ENST00000557933 ACTR3P61158 418 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 DEUP1Q05D60 604 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 HIC1Q14526 733 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 MTHFD1LQ6UB35 978 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 PIP4K2CQ8TBX8 421 aa12.77□□□□□ -0.36
LDLR-205ENST00000557933 VCPIP1Q96JH7 1222 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms