RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 EMC1Q8N766 993 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 FICDQ9BVA6 458 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 IFNA14P01570 189 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 RARAP10276 462 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 ALDH1A3P47895 512 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 CSHL1Q14406 222 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 TMEM119Q4V9L6 283 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 ZFP1Q6P2D0 407 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 AVENQ9NQS1 362 aaPredicted RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 ABI2Q9NYB9 513 aaPredicted RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 JCHAINP01591 159 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 ALADP13716 330 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 BST2Q10589 180 aaKnown RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 ZNF268Q14587 947 aaPredicted RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 PLEKHA7Q6IQ23 1121 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 GDPD5Q8WTR4 605 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 MTERF3Q96E29 417 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 GLP2RO95838 553 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 NCKAP1LP55160 1127 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 NME5P56597 212 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 IFI35P80217 286 aaPredicted RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 ARMCX4Q5H9R4 360 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 GLRA4Q5JXX5 417 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 FAM131BQ86XD5 332 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 ADGRF2Q8IZF7 708 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 DEFB129Q9H1M3 183 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 AGO4Q9HCK5 861 aaKnown RBP13.48□□□□□ -0.25
TNC-212ENST00000542877 POLG2Q9UHN1 485 aa13.48□□□□□ -0.25
TNC-212ENST00000542877 CHD1O14646 1710 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 NCF1BA6NI72 391 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 NCF1CA8MVU1 366 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 TRIM13O60858 407 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 NCF1P14598 390 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 PECAM1P16284 738 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 SLC26A2P50443 739 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 RAB14P61106 215 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 PLIN5Q00G26 463 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 CDH18Q13634 790 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 ERMARDQ5T6L9 678 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 ACER1Q8TDN7 264 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 STK32AQ8WU08 396 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 CASP10Q92851 521 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 ZFP42Q96MM3 310 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 COMMD8Q9NX08 183 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 DDX3XO00571 662 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNC-212ENST00000542877 CNOT3O75175 753 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 TNFAIP8O95379 198 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 KRT20P35900 424 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 PKN2Q16513 984 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 LPCAT2Q7L5N7 544 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 OSCP1Q8WVF1 389 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 SLC35C1Q96A29 364 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 ZDHHC15Q96MV8 337 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 PNMA5Q96PV4 448 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 GGA3Q9NZ52 723 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 KLK14Q9P0G3 267 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 C17orf102A2RUQ5 167 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 LRRC10BA6NIK2 292 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 CYB561D2O14569 222 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 POLD3Q15054 466 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 LRRC74BQ6ZQY2 392 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 ZNF75CPQ92670 426 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 SRPK1Q96SB4 655 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 CLPBQ9H078 707 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 KRCC1Q9NPI7 259 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 PDGFCQ9NRA1 345 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNC-212ENST00000542877 WBP4O75554 376 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 PGAM1P18669 254 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 RAP1GAPP47736 663 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 VPS72Q15906 364 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 YTHDF3Q7Z739 585 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 TATDN2Q93075 761 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 MYLK2Q9H1R3 596 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 CROTQ9UKG9 612 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 SNUPNO95149 360 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 CDK7P50613 346 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 CDK16Q00536 496 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 NAB1Q13506 487 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 RMND5BQ96G75 393 aaPredicted RBP13.47□□□□□ -0.25
TNC-212ENST00000542877 APOL2Q9BQE5 337 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 NDEL1Q9GZM8 345 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 KLHL25Q9H0H3 589 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 COPG2Q9UBF2 871 aa13.47□□□□□ -0.25
TNC-212ENST00000542877 SPATA31A1Q5TZJ5 1347 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 DDHD2O94830 711 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 TCF3P15923 654 aa13.46□□□□□ -0.25
TNC-212ENST00000542877 ITGALP20701 1170 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms