RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 LRRC40Q9H9A6 602 aa17.77■□□□□ 0.43
PHRF1-206ENST00000534320 KLHL2O95198 593 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 SERPINB1P30740 379 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 RAB27AP51159 221 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
PHRF1-206ENST00000534320 ZC3H12BQ5HYM0 836 aaKnown RBP17.76■□□□□ 0.43
PHRF1-206ENST00000534320 PDP2Q9P2J9 529 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 RBAK-RBAKDNI3L0D1 243 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 POMCP01189 267 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 CNGA3Q16281 694 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 CTXN3Q4LDR2 81 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 NCLNQ969V3 563 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 CDY2AQ9Y6F7 541 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 CDY1Q9Y6F8 540 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 GLRA3O75311 464 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 OVGP1Q12889 678 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 ITIH4Q14624 930 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 KIAA0319LQ8IZA0 1049 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 NAF1Q96HR8 494 aaKnown RBP17.76■□□□□ 0.43
PHRF1-206ENST00000534320 HES6Q96HZ4 224 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 COL1A1P02452 1464 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-206ENST00000534320 HOXC6P09630 235 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 MAP3K10Q02779 954 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 TWF1Q12792 350 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 KRT33BQ14525 404 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 CYTH1Q15438 398 aa17.76■□□□□ 0.43
PHRF1-206ENST00000534320 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.76■□□□□ 0.43
PHRF1-206ENST00000534320 H7C4K7 107 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 FARP2O94887 1054 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-206ENST00000534320 ZCWPW2Q504Y3 356 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 TRAF7Q6Q0C0 670 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 SLC51AQ86UW1 340 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 COLGALT1Q8NBJ5 622 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 NINJ2Q9NZG7 142 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 PKD2L2Q9NZM6 624 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 NRCAMQ92823 1304 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 C2CD2LO14523 706 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 PDE5AO76074 875 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 ATP6V1E1P36543 226 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 TIGD7Q6NT04 549 aaPredicted RBP17.75■□□□□ 0.43
PHRF1-206ENST00000534320 SNRNP27Q8WVK2 155 aaKnown RBP17.75■□□□□ 0.43
PHRF1-206ENST00000534320 POLE3Q9NRF9 147 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 COL20A1Q9P218 1284 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 SIGLEC16A6NMB1 481 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 ALDH1A1P00352 501 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 HGSNATQ68CP4 663 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 OVOS1Q6IE37 1185 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 TEKT4Q8WW24 435 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 NOL4O94818 638 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 JCHAINP01591 159 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 KCNA2P16389 499 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 HLA-DPA1P20036 260 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 SLC11A2P49281 568 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 CNGA2Q16280 664 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 ADCK1Q86TW2 530 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 SNX19Q92543 992 aa17.75■□□□□ 0.43
PHRF1-206ENST00000534320 E7ENQ6 273 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 BEX3Q00994 111 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 NFE2Q16621 373 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ANGPTL8Q6UXH0 198 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 AMIGO3Q86WK7 504 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ZBTB10Q96DT7 871 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 NDUFA13Q9P0J0 144 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 APOC4-APOC2K7ER74 178 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 NCAM2O15394 837 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ANP32DO95626 131 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 APOC2P02655 101 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 GHRP10912 638 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ELK3P41970 407 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 MARCKSL1P49006 195 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 EDEM1Q92611 657 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 DCDC2Q9UHG0 476 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 SH3BP1Q9Y3L3 701 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 B2RBV5 119 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 CCDC130P13994 396 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 SPDYCQ5MJ68 293 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 DEFB106AQ8N104 65 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ZNF142P52746 1687 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-206ENST00000534320 C16orf96A6NNT2 1141 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 IGF2BP3O00425 579 aaKnown RBP eCLIP17.74■□□□□ 0.43
PHRF1-206ENST00000534320 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
PHRF1-206ENST00000534320 S100A5P33763 92 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 BFSP2Q13515 415 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 PHF13Q86YI8 300 aaPredicted RBP17.74■□□□□ 0.43
PHRF1-206ENST00000534320 ARRDC4Q8NCT1 418 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 RRN3Q9NYV6 651 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 DLGAP2Q9P1A6 1054 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 PCYOX1Q9UHG3 505 aa17.74■□□□□ 0.43
PHRF1-206ENST00000534320 M0R2N6 131 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 PYGLP06737 847 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 KDELR1P24390 212 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 DAB2IPQ5VWQ8 1189 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 NSL1Q96IY1 281 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 APOL2Q9BQE5 337 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 STARD7Q9NQZ5 370 aa17.73■□□□□ 0.43
PHRF1-206ENST00000534320 OLA1Q9NTK5 396 aaKnown RBP17.73■□□□□ 0.43
PHRF1-206ENST00000534320 TRPV2Q9Y5S1 764 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms