RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SORCS1Q8WY21 1168 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 CNOT6LQ96LI5 555 aaKnown RBP10.12□□□□□ -0.79
SSBP3-215ENST00000533946 PNKPQ96T60 521 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 CLSTN2Q9H4D0 955 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 FBXO44Q9H4M3 255 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 ARHGEF4Q9NR80 690 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 NCDNQ9UBB6 729 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 SH3BP1Q9Y3L3 701 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 RAD54BQ9Y620 910 aa10.12□□□□□ -0.79
SSBP3-215ENST00000533946 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 SLC12A8A0AV02 714 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 MED19A0JLT2 244 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 NEDD8-MDP1E9PL57 170 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 TSPAN3O60637 253 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 TYRP14679 529 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 TUBP50607 506 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 MARSP56192 900 aaKnown RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 YWHAGP61981 247 aaKnown RBP eCLIP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 RSPO4Q2I0M5 234 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 SGO2Q562F6 1265 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 TMEM215Q68D42 235 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 PM20D1Q6GTS8 502 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 ANO7Q6IWH7 933 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 ZC3H14Q6PJT7 736 aaKnown RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 LCLAT1Q6UWP7 414 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 DENND1CQ8IV53 801 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 SYNPOQ8N3V7 929 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 WDTC1Q8N5D0 677 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 DEFB119Q8N690 84 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 CCDC150Q8NCX0 1101 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 MDGA1Q8NFP4 955 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 WFDC5Q8TCV5 224 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 NT5C1BQ96P26 610 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 NACA2Q9H009 215 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 MIS12Q9H081 205 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 DUSP15Q9H1R2 295 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 ARRDC1-AS1Q9H2J1 176 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 CD248Q9HCU0 757 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 UBE2TQ9NPD8 197 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 SAMSN1Q9NSI8 373 aaKnown RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 COMMD8Q9NX08 183 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 XPO7Q9UIA9 1087 aaKnown RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 DNMT3LQ9UJW3 386 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 AGO1Q9UL18 857 aaKnown RBP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.11□□□□□ -0.79
SSBP3-215ENST00000533946 SLC8A2Q9UPR5 921 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 NUP205Q92621 2012 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 AKAP13Q12802 2813 aa10.11□□□□□ -0.79
SSBP3-215ENST00000533946 ADAMTS9Q9P2N4 1935 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 A0A0A0MRY4 1105 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 PATE3B3GLJ2 98 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 M0QYV0 167 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 XPO1O14980 1071 aaKnown RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 HOXC11O43248 304 aaPredicted RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 STX10O60499 249 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 ZBED1O96006 694 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 AFPP02771 609 aaKnown RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 VDRP11473 427 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 PFKLP17858 780 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 CORO1AP31146 461 aaKnown RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 KLK7P49862 253 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 DAOAP59103 153 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 KCNMA1Q12791 1236 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 STIM1Q13586 685 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 ARHGAP44Q17R89 818 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 GEN1Q17RS7 908 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 MIIPQ5JXC2 388 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 FYB2Q5VWT5 728 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 SYPL2Q5VXT5 272 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 BSPRYQ5W0U4 402 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 SYT13Q7L8C5 426 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 FMNL3Q8IVF7 1028 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 GAB3Q8WWW8 586 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 BBS2Q9BXC9 721 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 ADAM33Q9BZ11 813 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 SEMA4AQ9H3S1 761 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 METTL14Q9HCE5 456 aaKnown RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 PNPLA8Q9NP80 782 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 PLCB1Q9NQ66 1216 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 FSCN3Q9NQT6 498 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 DNAJC17Q9NVM6 304 aaKnown RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 EHD2Q9NZN4 543 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 MARCH2Q9P0N8 246 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 RWDD2AQ9UIY3 292 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 MMP17Q9ULZ9 603 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 USP18Q9UMW8 372 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 ASPMQ8IZT6 3477 aa10.1□□□□□ -0.79
SSBP3-215ENST00000533946 TNRC6BQ9UPQ9 1833 aaKnown RBP10.1□□□□□ -0.79
SSBP3-215ENST00000533946 CEP192Q8TEP8 1941 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 CNOT1A5YKK6 2376 aaKnown RBP10.09□□□□□ -0.79
SSBP3-215ENST00000533946 NUMA1Q14980 2115 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 A0A1W2PQF6 199 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 TBC1D3BA6NDS4 549 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 GFRA2O00451 464 aa10.09□□□□□ -0.79
SSBP3-215ENST00000533946 PMM2O15305 246 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms