RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ABLIM1O14639 778 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 CHADO15335 359 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 GSPT1P15170 499 aaKnown RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 PNLIPP16233 465 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 AXLP30530 894 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 MCM5P33992 734 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 EPHA5P54756 1037 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 IRX4P78413 519 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 PFKFB3Q16875 520 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 UAP1L1Q3KQV9 507 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 ARSHQ5FYA8 562 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 STXBP5Q5T5C0 1151 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 SLC8B1Q6J4K2 584 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 FSTL4Q6MZW2 842 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 CASC1Q6TDU7 716 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 CEP128Q6ZU80 1094 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 PDZD4Q76G19 769 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 HS2ST1Q7LGA3 356 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 RALGPS2Q86X27 583 aaPredicted RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 LURAP1LQ8IV03 231 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 SYNPOQ8N3V7 929 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 RDM1Q8NG50 284 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 CSGALNACT1Q8TDX6 532 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 HNRNPLLQ8WVV9 542 aaKnown RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 MRRFQ96E11 262 aaKnown RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 ZMYND12Q9H0C1 365 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 GLT8D2Q9H1C3 349 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 XPNPEP1Q9NQW7 623 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 UBP1Q9NZI7 540 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 INSL5Q9Y5Q6 135 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 RBM8AQ9Y5S9 174 aaKnown RBP7.29□□□□□ -1.24
SDCBP-210ENST00000522843 ZMYM2Q9UBW7 1377 aa7.29□□□□□ -1.24
SDCBP-210ENST00000522843 MYO18BQ8IUG5 2567 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 THADAQ6YHU6 1953 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 A0A1B0GUA9 196 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ZC3H12DA2A288 527 aaKnown RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ZNF197O14709 1029 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 RGS13O14921 159 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ERLIN2O94905 339 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 UBOX5O94941 541 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 TDP2O95551 362 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 LRG1P02750 347 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 BCKDHBP21953 392 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 CHMLP26374 656 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 GBP1P32455 592 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 BRCC3P46736 316 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 PSMC5P62195 406 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 SIM1P81133 766 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 CAPSQ13938 189 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 EMC2Q15006 297 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ZXDCQ2QGD7 858 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 BMP2KLQ5H9B9 411 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 PMS2CLQ68D20 193 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 NAIF1Q69YI7 327 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 PDXDC1Q6P996 788 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 C1orf228Q6PIY5 440 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 APOA5Q6Q788 366 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 FAM129CQ86XR2 697 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 TMC8Q8IU68 726 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 TCEAL8Q8IYN2 117 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 TMEFF1Q8IYR6 380 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 REXO1Q8N1G1 1221 aaKnown RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 SYT8Q8NBV8 401 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 DAGLBQ8NCG7 672 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ZNF461Q8TAF7 563 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ETNPPLQ8TBG4 499 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 MZB1Q8WU39 189 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 LRIG1Q96JA1 1093 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 MAP6Q96JE9 813 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 CEP170P1Q96L14 293 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 JPH2Q9BR39 696 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 FBRSL1Q9HCM7 1045 aaKnown RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 LUC7LQ9NQ29 371 aaKnown RBP7.28□□□□□ -1.24
SDCBP-210ENST00000522843 INVSQ9Y283 1065 aa7.28□□□□□ -1.24
SDCBP-210ENST00000522843 ARID2Q68CP9 1835 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TNRC6BQ9UPQ9 1833 aaKnown RBP7.27□□□□□ -1.25
SDCBP-210ENST00000522843 CCDC194A0A1B0GVG4 234 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 ANTXRLA6NF34 631 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TMEM189-UBE2V1I3L0A0 370 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 INO80B-WBP1J3KQ70 363 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 SGSM2O43147 1006 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 EIF5BO60841 1220 aaKnown RBP7.27□□□□□ -1.25
SDCBP-210ENST00000522843 RHOBTB1O94844 696 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 ATE1O95260 518 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 VNN2O95498 520 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 EGFP01133 1207 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 EDN1P05305 212 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 PRKCBP05771 671 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 MYL4P12829 197 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 PLA2G2AP14555 144 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 ATF2P15336 505 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 CDR1P51861 262 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TWF1Q12792 350 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 ELAVL2Q12926 359 aaKnown RBP7.27□□□□□ -1.25
SDCBP-210ENST00000522843 SEMA3BQ13214 749 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 Q4G0T1 1027 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 SEZ6Q53EL9 994 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 TMEM196Q5HYL7 178 aa7.27□□□□□ -1.25
SDCBP-210ENST00000522843 CYP4A22Q5TCH4 519 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms