RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 MT-ND5P03915 603 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 PSG1P11464 419 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 TNFRSF1BP20333 461 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 CPA2P48052 419 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 ME1P48163 572 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 MTHFSP49914 203 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 NANOS2P60321 138 aaKnown RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 EIF4A1P60842 406 aaKnown RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 ID2Q02363 134 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 GAB1Q13480 694 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 MTX1Q13505 466 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 RAPGEF1Q13905 1077 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 PPP2R5AQ15172 486 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 C4orf46Q504U0 113 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 CC2D1BQ5T0F9 858 aaKnown RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 VSTM1Q6UX27 236 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 DEF8Q6ZN54 512 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 CHST15Q7LFX5 561 aaPredicted RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 C14orf80Q86SX3 495 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 TCEAL8Q8IYN2 117 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 PNPLA1Q8N8W4 532 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 CUL5Q93034 780 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 TSR2Q969E8 191 aaKnown RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 GATA5Q9BWX5 397 aaPredicted RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 TRIM36Q9NQ86 728 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 GJB4Q9NTQ9 266 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 POT1Q9NUX5 634 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 PI4KBQ9UBF8 816 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 DNAJB11Q9UBS4 358 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 CAPN11Q9UMQ6 739 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 VPS4AQ9UN37 437 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 HPSEQ9Y251 543 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 PCDHGB6Q9Y5F9 930 aa2.75□□□□□ -1.97
PDGFC-208ENST00000512711 SIRT4Q9Y6E7 314 aaPredicted RBP2.75□□□□□ -1.97
PDGFC-208ENST00000512711 TTBK1Q5TCY1 1321 aaPredicted RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 IGKV2D-30A0A075B6S6 120 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 A0A1W2PPC1 479 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 SLC22A23A1A5C7 686 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 VSTM5A8MXK1 200 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 H3BNX3 289 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 GOLIM4O00461 696 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 SNX2O60749 519 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 CNOT3O75175 753 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 RNF8O76064 485 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 HRGP04196 525 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 TMIGD3P0DMS9 266 aaPredicted RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 CD19P15391 556 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 HOXB6P17509 224 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 ADRA1DP25100 572 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 PEX2P28328 305 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 HOXA7P31268 230 aaPredicted RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 IDUAP35475 653 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 PBX1P40424 430 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 CARSP49589 748 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 SRSF1Q07955 248 aaKnown RBP eCLIP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 DNASE1L3Q13609 305 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 TWIST1Q15672 202 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 PFKFB3Q16875 520 aaPredicted RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 FAM110CQ1W6H9 321 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 NXNQ6DKJ4 435 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 COLCA1Q6ZS62 124 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 MEPCEQ7L2J0 689 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 UBE2Q1Q7Z7E8 422 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 ANKRD13BQ86YJ7 626 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 YAF2Q8IY57 180 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 C16orf71Q8IYS4 520 aaPredicted RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 PELI3Q8N2H9 469 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 MSI2Q96DH6 328 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 TRMT61AQ96FX7 289 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 SNX22Q96L94 193 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 SELENOOQ9BVL4 669 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 LRRC27Q9C0I9 530 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 FAM204AQ9H8W3 233 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 ZBTB40Q9NUA8 1239 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 STEAP1Q9UHE8 339 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 G3BP2Q9UN86 482 aaKnown RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 PCDHB2Q9Y5E7 798 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 HEMK1Q9Y5R4 338 aaPredicted RBP2.74□□□□□ -1.97
PDGFC-208ENST00000512711 HS3ST3B1Q9Y662 390 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 SQORQ9Y6N5 450 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 COL15A1P39059 1388 aa2.74□□□□□ -1.97
PDGFC-208ENST00000512711 FRMPD2Q68DX3 1309 aaPredicted RBP2.73□□□□□ -1.97
PDGFC-208ENST00000512711 AQP7P3A6NL99 342 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 C2CD4BA6NLJ0 364 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ZNF814B7Z6K7 855 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 TSPAN6O43657 245 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 CBFA2T3O75081 653 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ZBED1O96006 694 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 PLAUP00749 431 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 TMEM225BP0DP42 221 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ATICP31939 592 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 CACNB3P54284 484 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 RPS13P62277 151 aaKnown RBP2.73□□□□□ -1.97
PDGFC-208ENST00000512711 RAE1P78406 368 aaKnown RBP2.73□□□□□ -1.97
PDGFC-208ENST00000512711 CCDC15Q0P6D6 951 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 SEMA5AQ13591 1074 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 POLD3Q15054 466 aaPredicted RBP2.73□□□□□ -1.97
PDGFC-208ENST00000512711 ACOX1Q15067 660 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 SLC9C1Q4G0N8 1177 aa2.73□□□□□ -1.97
PDGFC-208ENST00000512711 AASDHQ4L235 1098 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms