RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 KRT87PA6NCN2 255 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 MPOP05164 745 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ALOX15P16050 662 aaPredicted RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 DEFA1P59665 94 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 DEFA3P59666 94 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 RASA2Q15283 850 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 SLC22A9Q8IVM8 553 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 DDI1Q8WTU0 396 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 YIPF2Q9BWQ6 316 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 GANQ9H2C0 597 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 DCLRE1BQ9H816 532 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 EXOSC4Q9NPD3 245 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 TSPAN16Q9UKR8 245 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 RAB21Q9UL25 225 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 F8W810 466 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 SERPINB3P29508 390 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 PEX5P50542 639 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 MRPS15P82914 257 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 MRPL28Q13084 256 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ITGA9Q13797 1035 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 MTDHQ86UE4 582 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ADGRE3Q9BY15 652 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 SLC12A8A0AV02 714 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 INSRRP14616 1297 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ANXA11P50995 505 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 SOX10P56693 466 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 IRX1P78414 480 aaPredicted RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 BFSP2Q13515 415 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 FUT11Q495W5 492 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 ARMC6Q6NXE6 501 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 CCDC60Q8IWA6 550 aaPredicted RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 MICU2Q8IYU8 434 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 DIS3LQ8TF46 1054 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 SLC25A13Q9UJS0 675 aa17.01■□□□□ 0.31
PCDHA1-203ENST00000504120 RANBP1P43487 201 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 NCALDP61601 193 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 CHRNB3Q05901 458 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 ADRM1Q16186 407 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 TRIM60Q495X7 471 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 FAM163AQ96GL9 167 aaPredicted RBP17■□□□□ 0.31
PCDHA1-203ENST00000504120 APOL2Q9BQE5 337 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 RXFP1Q9HBX9 757 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 RHOCP08134 193 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 PAEPP09466 180 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 BGNP21810 368 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 ST3GAL1Q11201 340 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 CNTN1Q12860 1018 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 NFIL3Q16649 462 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 CNBD2Q96M20 576 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 ZCWPW1Q9H0M4 648 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 E7ENQ6 273 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 TPST1O60507 370 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 PTPN4P29074 926 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 NDST1P52848 882 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 MTA1Q13330 715 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 CYP2W1Q8TAV3 490 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 CDK5RAP1Q96SZ6 601 aaKnown RBP17■□□□□ 0.31
PCDHA1-203ENST00000504120 OSMRQ99650 979 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 IDI2Q9BXS1 227 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 NDUFA13Q9P0J0 144 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 H3BQF6 201 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 MLNP12872 115 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 GALNTL6Q49A17 601 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 ILDR1Q86SU0 546 aaPredicted RBP17■□□□□ 0.31
PCDHA1-203ENST00000504120 CARNMT1Q8N4J0 409 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 TDRD5Q8NAT2 981 aaKnown RBP17■□□□□ 0.31
PCDHA1-203ENST00000504120 JADE3Q92613 823 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 SYT15Q9BQS2 421 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 BLOC1S4Q9NUP1 217 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 SYNPO2Q9UMS6 1093 aa17■□□□□ 0.31
PCDHA1-203ENST00000504120 CCR1P32246 355 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NR2C2P49116 596 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 BLVRAP53004 296 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 MEA1Q16626 185 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 BHMTQ93088 406 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 CYP4F12Q9HCS2 524 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 DDX43Q9NXZ2 648 aaKnown RBP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NCF1BA6NI72 391 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NCF1CA8MVU1 366 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 GSNP06396 782 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NCF1P14598 390 aaPredicted RBP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 RAB27AP51159 221 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 CDH17Q12864 832 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NFYCQ13952 458 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 GRIK4Q16099 956 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 TMC3Q7Z5M5 1100 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 OOSP2Q86WS3 158 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 BRSK2Q8IWQ3 736 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 UCMAQ8WVF2 138 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 CXorf56Q9H5V9 222 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 NT5MQ9NPB1 228 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 IMPAD1Q9NX62 359 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 SNTG2Q9NY99 539 aa16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 DDX3XO00571 662 aaKnown RBP eCLIP16.99■□□□□ 0.31
PCDHA1-203ENST00000504120 CYP3A4P08684 503 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms