RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 KBTBD13C9JR72 458 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 HOXB7P09629 217 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 AMPD3Q01432 767 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 TLE2Q04725 743 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 KRT24Q2M2I5 525 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 APOBEC3HQ6NTF7 200 aaKnown RBP5.63□□□□□ -1.51
BRCA1-217ENST00000487825 BOLLQ8N9W6 283 aaKnown RBP5.63□□□□□ -1.51
BRCA1-217ENST00000487825 NSUN7Q8NE18 718 aaKnown RBP5.63□□□□□ -1.51
BRCA1-217ENST00000487825 TDRD7Q8NHU6 1098 aaKnown RBP5.63□□□□□ -1.51
BRCA1-217ENST00000487825 ACTRT2Q8TDY3 377 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 FAM151AQ8WW52 585 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 ANKS1AQ92625 1134 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 DUSP26Q9BV47 211 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 SLC28A3Q9HAS3 691 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 ALG13Q9NP73 1137 aaKnown RBP5.63□□□□□ -1.51
BRCA1-217ENST00000487825 KCTD5Q9NXV2 234 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-217ENST00000487825 MTCH2Q9Y6C9 303 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 CHD8Q9HCK8 2581 aa5.63□□□□□ -1.51
BRCA1-217ENST00000487825 CACNA1FO60840 1977 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 DCXO43602 365 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 SGTAO43765 313 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 TAF5LO75529 589 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 MAPK4P31152 587 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 MRPS21P82921 87 aaKnown RBP5.62□□□□□ -1.51
BRCA1-217ENST00000487825 RAB39AQ14964 217 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 ODF1Q14990 250 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 PTPN21Q16825 1174 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 CCDC142Q17RM4 750 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 TMEM240Q5SV17 173 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF362Q5T0B9 420 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-217ENST00000487825 LNX2Q8N448 690 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 IL17RDQ8NFM7 739 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 MRGPRX4Q96LA9 322 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 KLHL32Q96NJ5 620 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 PLEKHF1Q96S99 279 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 DMRTA2Q96SC8 542 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 IMPG2Q9BZV3 1241 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 FLRT1Q9NZU1 646 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 JKAMPQ9P055 326 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 COX11Q9Y6N1 276 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF521Q96K83 1311 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 COL4A6Q14031 1691 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 PCSK5Q92824 1860 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 GVINP1Q7Z2Y8 2422 aa5.62□□□□□ -1.51
BRCA1-217ENST00000487825 MAP1BP46821 2468 aaKnown RBP5.62□□□□□ -1.51
BRCA1-217ENST00000487825 ACACBO00763 2458 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 SIPA1L1O43166 1804 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 PEX1O43933 1283 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 SLC43A1O75387 559 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 TNKSO95271 1327 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 HSPA5P11021 654 aaKnown RBP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 CYBAP13498 195 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 RARRES1P49788 294 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 TLE1Q04724 770 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF844Q08AG5 666 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 PPIGQ13427 754 aaKnown RBP eCLIP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 CD300EQ496F6 205 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 MFSD14CQ5VZR4 134 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 SP5Q6BEB4 398 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 PSRC1Q6PGN9 363 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 CCDC174Q6PII3 467 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 GPR142Q7Z601 462 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 CLNKQ7Z7G1 428 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 TRPV1Q8NER1 839 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 TMIEQ8NEW7 156 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 SMAD5Q99717 465 aaKnown RBP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 VRK1Q99986 396 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-217ENST00000487825 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 WDR87Q6ZQQ6 2873 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF292O60281 2723 aa5.61□□□□□ -1.51
BRCA1-217ENST00000487825 ATG2AQ2TAZ0 1938 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 GAKO14976 1311 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 PRAMEF33A0A0G2JMD5 474 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 A0A1W2PS29 197 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 YY2O15391 372 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 PRAMEF10O60809 474 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 PQBP1O60828 265 aaKnown RBP5.6□□□□□ -1.51
BRCA1-217ENST00000487825 TIMP1P01033 207 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 SLC5A1P13866 664 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 KCNA2P16389 499 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 FBLP22087 321 aaKnown RBP5.6□□□□□ -1.51
BRCA1-217ENST00000487825 GATA3P23771 443 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 CCND1P24385 295 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 C21orf58P58505 322 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 TCP10Q12799 353 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 TCF15Q12870 199 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 KHDC1Q4VXA5 237 aaKnown RBP5.6□□□□□ -1.51
BRCA1-217ENST00000487825 ZNF365Q70YC5 407 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 FAM98AQ8NCA5 519 aaKnown RBP5.6□□□□□ -1.51
BRCA1-217ENST00000487825 SLC44A5Q8NCS7 719 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 GPRC5AQ8NFJ5 357 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 SLC30A5Q8TAD4 765 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 TBC1D22AQ8WUA7 517 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 VOPP1Q96AW1 172 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 PORCNQ9H237 461 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 TXNRD2Q9NNW7 524 aa5.6□□□□□ -1.51
BRCA1-217ENST00000487825 IL17RBQ9NRM6 502 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms