RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SYNJ2O15056 1496 aa5.69□□□□□ -1.5
PRPF38A-203ENST00000487160 RRN3P2A6NIE6 340 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 KIF28PB7ZC32 967 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 PRKCBP05771 671 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 NR2F6P10588 404 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 JUPP14923 745 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 ZFXP17010 805 aaPredicted RBP5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 DRD1P21728 446 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 FOLR3P41439 243 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 GSTM5P46439 218 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 BMPR2Q13873 1038 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 RPS6KA2Q15349 733 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 TXNRD1Q16881 649 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 LY6G5CQ5SRR4 150 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 FNDC7Q5VTL7 733 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 GRHL2Q6ISB3 625 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 C2CD5Q86YS7 1000 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 HERC6Q8IVU3 1022 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 CLASRPQ8N2M8 674 aaKnown RBP5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 OR6Y1Q8NGX8 325 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 SH3RF3Q8TEJ3 882 aaPredicted RBP5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 THAP4Q8WY91 577 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 RFKQ969G6 155 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 CTHRC1Q96CG8 243 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 WDYHV1Q96HA8 205 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 PYM1Q9BRP8 204 aaKnown RBP5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 ALG8Q9BVK2 526 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 TRIM36Q9NQ86 728 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 PGAP2Q9UHJ9 254 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 CCNL1Q9UK58 526 aaPredicted RBP5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 FGD5Q6ZNL6 1462 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 TSPOAP1O95153 1857 aa5.68□□□□□ -1.5
PRPF38A-203ENST00000487160 SOGA1O94964 1423 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 GRIN2BQ13224 1484 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 AP4M1O00189 453 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 KIAA0355O15063 1070 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 MPPED1O15442 326 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 CTIFO43310 598 aaKnown RBP5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 SPRY2O43597 315 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 PMPCBO75439 489 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 KRT38O76015 456 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 ONECUT2O95948 504 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 CREB1P16220 341 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 CD53P19397 219 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 GKP32189 559 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 AARSP49588 968 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 KCNJ12Q14500 433 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 CYP1B1Q16678 543 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM110CQ1W6H9 321 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 LSM12Q3MHD2 195 aaKnown RBP5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 KAZNQ674X7 775 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 TRABD2AQ86V40 505 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 LRRC71Q8N4P6 559 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 SLC22A17Q8WUG5 538 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 HMGB4Q8WW32 186 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 PBKQ96KB5 322 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 PRR25Q96S07 402 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 EIF3CQ99613 913 aaKnown RBP5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 TTPALQ9BTX7 342 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 RIC8AQ9NPQ8 531 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 VPS45Q9NRW7 570 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 GGA3Q9NZ52 723 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 ANAPC4Q9UJX5 808 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 ASAP1Q9ULH1 1129 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 C19orf53Q9UNZ5 99 aaPredicted RBP5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 SH2B3Q9UQQ2 575 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 PCDHB7Q9Y5E2 793 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 CEP170Q5SW79 1584 aa5.67□□□□□ -1.5
PRPF38A-203ENST00000487160 SHROOM2Q13796 1616 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 ABCA5Q8WWZ7 1642 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 A8MVJ9 347 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 EFCAB8A8MWE9 144 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 E7EVH7 732 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 NXPH3O95157 252 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 POLBP06746 335 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 RXRAP19793 462 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 CNTFP26441 200 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 MCM5P33992 734 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 E2F1Q01094 437 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 DEUP1Q05D60 604 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 BFSP2Q13515 415 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 PTPAQ15257 358 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 ST3GAL2Q16842 350 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 SPATS1Q496A3 300 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 AASDHQ4L235 1098 aaPredicted RBP5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 MIIPQ5JXC2 388 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 TTC22Q5TAA0 569 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 FAM90A2PQ658T7 463 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 KIAA0895LQ68EN5 471 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 Q6ZNX1 250 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 SPRED1Q7Z699 444 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 P3H2Q8IVL5 708 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 LCORLQ8N3X6 602 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 SLC44A3Q8N4M1 653 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 SIMC1Q8NDZ2 872 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 GOLGA1Q92805 767 aa5.66□□□□□ -1.5
PRPF38A-203ENST00000487160 USP13Q92995 863 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms