RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 YWHAGP61981 247 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 AMPD2Q01433 879 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 SPEM2Q0P670 501 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 BST2Q10589 180 aaKnown RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 EFEMP1Q12805 493 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 DPCR1Q3MIW9 517 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 LCLAT1Q6UWP7 414 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 KBTBD6Q86V97 674 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 ZNF276Q8N554 614 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 TTC39CQ8N584 583 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 TRIML1Q8N9V2 468 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 RBBP8NLQ8NC74 664 aaPredicted RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 SLC35F5Q8WV83 523 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 SECISBP2LQ93073 1101 aaKnown RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 BHMTQ93088 406 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 OTUB2Q96DC9 234 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CNOT6LQ96LI5 555 aaKnown RBP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CRACR2AQ9BSW2 395 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 NACA2Q9H009 215 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CD248Q9HCU0 757 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 ARHGEF4Q9NR80 690 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 PLK2Q9NYY3 685 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CLIC5Q9NZA1 410 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 NCDNQ9UBB6 729 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CYTH4Q9UIA0 394 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 RASAL2Q9UJF2 1139 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 DNMT3LQ9UJW3 386 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 MMP17Q9ULZ9 603 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDLBP-239ENST00000483086 SLC8A2Q9UPR5 921 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 CNTN6Q9UQ52 1028 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 INVSQ9Y283 1065 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 PCDHB4Q9Y5E5 795 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 PI4KAP42356 2102 aa12.68□□□□□ -0.38
HDLBP-239ENST00000483086 BECN2A8MW95 431 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 NEDD8-MDP1E9PL57 170 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 ZBED1O96006 694 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 PAEPP09466 180 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 TYRP14679 529 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
HDLBP-239ENST00000483086 GAD2Q05329 585 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 PPP2R5DQ14738 602 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 CCDC6Q16204 474 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 CRY1Q16526 586 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 ANO4Q32M45 955 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 FYB2Q5VWT5 728 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 CLEC17AQ6ZS10 378 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 RASSF3Q86WH2 238 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 FRMD1Q8N878 549 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 TXNDC5Q8NBS9 432 aaKnown RBP12.67□□□□□ -0.38
HDLBP-239ENST00000483086 MDGA1Q8NFP4 955 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 GAB3Q8WWW8 586 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 EDEM1Q92611 657 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 ERLEC1Q96DZ1 483 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 ACOX2Q99424 681 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 SIX2Q9NPC8 291 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 RXFP3Q9NSD7 469 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 MARK1Q9P0L2 795 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 TJP2Q9UDY2 1190 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
HDLBP-239ENST00000483086 AGO1Q9UL18 857 aaKnown RBP12.67□□□□□ -0.38
HDLBP-239ENST00000483086 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDLBP-239ENST00000483086 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.67□□□□□ -0.38
HDLBP-239ENST00000483086 ADAMTS9Q9P2N4 1935 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 CCDC163A0A0D9SF12 145 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 AXIN1O15169 862 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
HDLBP-239ENST00000483086 CACNG3O60359 315 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 GDF9O60383 454 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 ATG13O75143 517 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 RPP40O75818 363 aaKnown RBP12.66□□□□□ -0.38
HDLBP-239ENST00000483086 KLF8O95600 359 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-239ENST00000483086 APODP05090 189 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 FYNP06241 537 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 LCP1P13796 627 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 BCKDHBP21953 392 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 CORO1AP31146 461 aaKnown RBP12.66□□□□□ -0.38
HDLBP-239ENST00000483086 GRIA2P42262 883 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 PSEN1P49768 467 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 DAOAP59103 153 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 GCNT1Q02742 428 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 CNGA2Q16280 664 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 EGFLAMQ63HQ2 1017 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 LAIR1Q6GTX8 287 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 DENND1BQ6P3S1 775 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 TERB1Q8NA31 727 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 KCTD13Q8WZ19 329 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
HDLBP-239ENST00000483086 SMOC1Q9H4F8 434 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 FBXO10Q9UK96 956 aa12.66□□□□□ -0.38
HDLBP-239ENST00000483086 CNOT1A5YKK6 2376 aaKnown RBP12.66□□□□□ -0.38
HDLBP-239ENST00000483086 SLC12A8A0AV02 714 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 M0QYV0 167 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 GFRA2O00451 464 aa12.65□□□□□ -0.38
HDLBP-239ENST00000483086 APBB3O95704 486 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms