RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 NQO1P15559 274 aaKnown RBP17.1■□□□□ 0.33
TMEM53-208ENST00000476724 IL4RP24394 825 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 SLC8A1P32418 973 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 RGS7P49802 495 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 LVRNQ6Q4G3 990 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 ACOT1Q86TX2 421 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 ECHDC2Q86YB7 292 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 FAM172AQ8WUF8 416 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 PIWIL1Q96J94 861 aaKnown RBP17.1■□□□□ 0.33
TMEM53-208ENST00000476724 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 PCDH18Q9HCL0 1135 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 NGRNQ9NPE2 291 aaKnown RBP17.1■□□□□ 0.33
TMEM53-208ENST00000476724 CYLDQ9NQC7 956 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 SNTG2Q9NY99 539 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 IKBKGQ9Y6K9 419 aa17.1■□□□□ 0.33
TMEM53-208ENST00000476724 PIK3R2O00459 728 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 KPNA6O60684 536 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 GRAP2O75791 330 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 ASGR1P07306 291 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 GNAT1P11488 350 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 ELK3P41970 407 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 PTPN9P43378 593 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 VEGFBP49765 207 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 NKX3-2P78367 333 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 ATP11AP98196 1134 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 C1orf228Q6PIY5 440 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 TBC1D1Q86TI0 1168 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-208ENST00000476724 KHSRPQ92945 711 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM53-208ENST00000476724 KLHL29Q96CT2 875 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 TSPAN18Q96SJ8 248 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 VPS11Q9H270 941 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 GGT7Q9UJ14 662 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 CHMP2BQ9UQN3 213 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 SCN1AP35498 2009 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 DCTN3O75935 186 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 ZFXP17010 805 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-208ENST00000476724 MAGEA6P43360 314 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 MGAT5Q09328 741 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 KCNA10Q16322 511 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
TMEM53-208ENST00000476724 PQLC3Q8N755 202 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 BANPQ8N9N5 519 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 KLC2Q9H0B6 622 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 RNF19AQ9NV58 838 aa17.09■□□□□ 0.33
TMEM53-208ENST00000476724 KCNN4O15554 427 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 PAPSS1O43252 624 aaPredicted RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 ZBED1O96006 694 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 MT-ND3P03897 115 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 GSTA2P09210 222 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 CCNB1P14635 433 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 AXLP30530 894 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 EFTUD2Q15029 972 aaKnown RBP eCLIP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 CCSAPQ6IQ19 270 aaPredicted RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 ALKAL1Q6UXT8 129 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 SCUBE3Q8IX30 993 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 KLHDC9Q8NEP7 349 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 OR6B3Q8NGW1 331 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 ZNF398Q8TD17 642 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 SLC44A1Q8WWI5 657 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 ZNF75CPQ92670 426 aaPredicted RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 LRRC39Q96DD0 335 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 ZMAT2Q96NC0 199 aaKnown RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 SNRNP25Q9BV90 132 aaKnown RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 NXF3Q9H4D5 531 aaKnown RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 ARHGEF3Q9NR81 526 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 RAB6BQ9NRW1 208 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 CNTN3Q9P232 1028 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 GRID1Q9ULK0 1009 aa17.08■□□□□ 0.33
TMEM53-208ENST00000476724 UBQLN1Q9UMX0 589 aaKnown RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 PIN4Q9Y237 131 aaKnown RBP17.08■□□□□ 0.33
TMEM53-208ENST00000476724 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
TMEM53-208ENST00000476724 ATP6V1G2O95670 118 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 CD4P01730 458 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 ALADP13716 330 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 CRYBB1P53674 252 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-208ENST00000476724 RAB6CQ53S08 254 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 SPDYAQ5MJ70 313 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 ASRGL1Q7L266 308 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 CDKL3Q8IVW4 592 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-208ENST00000476724 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 ZNF784Q8NCA9 323 aaPredicted RBP17.08■□□□□ 0.32
TMEM53-208ENST00000476724 PCDH19Q8TAB3 1148 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 RAB6CQ9H0N0 254 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 TXLNGQ9NUQ3 528 aa17.08■□□□□ 0.32
TMEM53-208ENST00000476724 PDCD11Q14690 1871 aaKnown RBP17.07■□□□□ 0.32
TMEM53-208ENST00000476724 TCRBV9S1A1TA0A576 114 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 XPOTO43592 962 aaKnown RBP17.07■□□□□ 0.32
TMEM53-208ENST00000476724 UNC5CO95185 931 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 INHBAP08476 426 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 ACADSBP45954 432 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 NR2C2P49116 596 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 RPL34P49207 117 aaKnown RBP17.07■□□□□ 0.32
TMEM53-208ENST00000476724 BST2Q10589 180 aaKnown RBP17.07■□□□□ 0.32
TMEM53-208ENST00000476724 SLC26A9Q7LBE3 791 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 NME8Q8N427 588 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 ANKRD52Q8NB46 1076 aa17.07■□□□□ 0.32
TMEM53-208ENST00000476724 MCUQ8NE86 351 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms