RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 KCNU1A8MYU2 1149 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 PPEF2O14830 753 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 ANXA2P07355 339 aaKnown RBP6.6□□□□□ -1.35
CCDC39-202ENST00000471307 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
CCDC39-202ENST00000471307 RBL1P28749 1068 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 ARHGAP25P42331 645 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 DCDC5Q6ZRR9 648 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 USP49Q70CQ1 688 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 CNGA4Q8IV77 575 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 PRSS3P2Q8NHM4 247 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 MAFAQ8NHW3 353 aaPredicted RBP6.6□□□□□ -1.35
CCDC39-202ENST00000471307 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.6□□□□□ -1.35
CCDC39-202ENST00000471307 PHKBQ93100 1093 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 HS6ST2Q96MM7 605 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 EFHD1Q9BUP0 239 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 SELENOOQ9BVL4 669 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 VPS16Q9H269 839 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 DDX21Q9NR30 783 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCDC39-202ENST00000471307 LPAR3Q9UBY5 353 aa6.6□□□□□ -1.35
CCDC39-202ENST00000471307 PTPRGP23470 1445 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 COL15A1P39059 1388 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 AGPSO00116 658 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 ADRA1DP25100 572 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 MCM5P33992 734 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 PLCD1P51178 756 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 HTRA4P83105 476 aaPredicted RBP6.59□□□□□ -1.35
CCDC39-202ENST00000471307 LAMB3Q13751 1172 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 KCNB1Q14721 858 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 PXDC1Q5TGL8 231 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 MANEALQ5VSG8 457 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 RNF44Q7L0R7 432 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 DGKHQ86XP1 1220 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 C12orf76Q8N812 135 aaPredicted RBP6.59□□□□□ -1.35
CCDC39-202ENST00000471307 PNPLA8Q9NP80 782 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 KLHL13Q9P2N7 655 aa6.59□□□□□ -1.35
CCDC39-202ENST00000471307 CASKIN1Q8WXD9 1431 aa6.59□□□□□ -1.36
CCDC39-202ENST00000471307 ZNF521Q96K83 1311 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 FCHO1O14526 889 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 IL18RAPO95256 599 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 COPAP53621 1224 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 EIF4A1P60842 406 aaKnown RBP6.58□□□□□ -1.36
CCDC39-202ENST00000471307 DAG1Q14118 895 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 ANO7Q6IWH7 933 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 KRT73Q86Y46 540 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 LIX1LQ8IVB5 337 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 MBD3L2Q8NHZ7 208 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-202ENST00000471307 OSR1Q8TAX0 266 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-202ENST00000471307 CUL5Q93034 780 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 EDC3Q96F86 508 aaKnown RBP6.58□□□□□ -1.36
CCDC39-202ENST00000471307 ZC3H10Q96K80 434 aaKnown RBP6.58□□□□□ -1.36
CCDC39-202ENST00000471307 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
CCDC39-202ENST00000471307 PI4KBQ9UBF8 816 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 HPSEQ9Y251 543 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 SLC27A6Q9Y2P4 619 aa6.58□□□□□ -1.36
CCDC39-202ENST00000471307 THAP12O43422 761 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 ATF7P17544 494 aaPredicted RBP6.57□□□□□ -1.36
CCDC39-202ENST00000471307 GHRHRQ02643 423 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 KCNAB1Q14722 419 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 RANBP10Q6VN20 620 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 KRT28Q7Z3Y7 464 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 WDR75Q8IWA0 830 aaKnown RBP6.57□□□□□ -1.36
CCDC39-202ENST00000471307 METTL25Q8N6Q8 603 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCDC39-202ENST00000471307 COQ8BQ96D53 544 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 IQCDQ96DY2 449 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 HIC2Q96JB3 615 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 HEYLQ9NQ87 328 aaPredicted RBP6.57□□□□□ -1.36
CCDC39-202ENST00000471307 KLHL42Q9P2K6 505 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 PCDHGB6Q9Y5F9 930 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 SNX13Q9Y5W8 968 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 FYCO1Q9BQS8 1478 aa6.57□□□□□ -1.36
CCDC39-202ENST00000471307 MAP3K1Q13233 1512 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 TTBK1Q5TCY1 1321 aaPredicted RBP6.56□□□□□ -1.36
CCDC39-202ENST00000471307 CLCA1A8K7I4 914 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 F8W8V4 182 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 BMP15O95972 392 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 FGBP02675 491 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 TXNL4AP83876 142 aaKnown RBP6.56□□□□□ -1.36
CCDC39-202ENST00000471307 MRPL10Q7Z7H8 261 aaKnown RBP6.56□□□□□ -1.36
CCDC39-202ENST00000471307 FMNL3Q8IVF7 1028 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 C11orf44Q8N8P7 122 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 CINPQ9BW66 212 aaPredicted RBP6.56□□□□□ -1.36
CCDC39-202ENST00000471307 FZD4Q9ULV1 537 aa6.56□□□□□ -1.36
CCDC39-202ENST00000471307 RHPN2P1A8MT19 583 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 IGKV2-30P06310 120 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 TMEM225BP0DP42 221 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 MFSD13AQ14CX5 517 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 Q4G0T1 1027 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 DEF8Q6ZN54 512 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 MAP4K1Q92918 833 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 HMCESQ96FZ2 354 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 KAZALD1Q96I82 304 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 ELOVL5Q9NYP7 299 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 ERCC6L2Q5T890 1561 aa6.55□□□□□ -1.36
CCDC39-202ENST00000471307 SPATA31A1Q5TZJ5 1347 aa6.54□□□□□ -1.36
CCDC39-202ENST00000471307 UACAQ9BZF9 1416 aa6.54□□□□□ -1.36
CCDC39-202ENST00000471307 CLIC1O00299 241 aa6.54□□□□□ -1.36
CCDC39-202ENST00000471307 AREL1O15033 823 aa6.54□□□□□ -1.36
CCDC39-202ENST00000471307 NTSR1P30989 418 aa6.54□□□□□ -1.36
CCDC39-202ENST00000471307 HTR7P34969 479 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms