RNA–Protein interactions for RNA: ENST00000469027.5

TRAIP-202, Transcript of TRAF interacting protein, humanhuman

TSL 5 BASIC

Gene TRAIP, Length 1,145 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-202ENST00000469027 SCN1AP35498 2009 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 A1L4Q6 167 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 VILLO15195 856 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 CLDN3O15551 220 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 CYP26A1O43174 497 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 TOM1L1O75674 476 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 SEMA4FO95754 770 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 IGLV3-19P01714 112 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 FDPSP14324 419 aaKnown RBP11.27□□□□□ -0.61
TRAIP-202ENST00000469027 NPTX2P47972 431 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 TAF6P49848 677 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 RACK1P63244 317 aaKnown RBP11.27□□□□□ -0.61
TRAIP-202ENST00000469027 BNIP3Q12983 259 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 STRN3Q13033 797 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 PDIA5Q14554 519 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 SHBQ15464 509 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 SPATA1Q5VX52 437 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 BBS7Q8IWZ6 715 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 SPATA20Q8TB22 786 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.61
TRAIP-202ENST00000469027 LEO1Q8WVC0 666 aaPredicted RBP11.27□□□□□ -0.61
TRAIP-202ENST00000469027 SLC6A18Q96N87 628 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 BBS2Q9BXC9 721 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 TMEM134Q9H6X4 195 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 KMT5AQ9NQR1 393 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 GDF3Q9NR23 364 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 AASDHPPTQ9NRN7 309 aa11.27□□□□□ -0.61
TRAIP-202ENST00000469027 ORC3Q9UBD5 711 aaPredicted RBP11.27□□□□□ -0.61
TRAIP-202ENST00000469027 ARID1BQ8NFD5 2236 aaPredicted RBP11.27□□□□□ -0.61
TRAIP-202ENST00000469027 BSNQ9UPA5 3926 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 PFKFB2O60825 505 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 REC8O95072 547 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 IRF1P10914 325 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 ACAT1P24752 427 aaKnown RBP11.26□□□□□ -0.61
TRAIP-202ENST00000469027 DGKGP49619 791 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 CDH8P55286 799 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 ASIC1P78348 528 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 KRTAP21-3Q3LHN1 58 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 JADE1Q6IE81 842 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 SLC46A1Q96NT5 459 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 BTBD1Q9H0C5 482 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 GZF1Q9H116 711 aaPredicted RBP11.26□□□□□ -0.61
TRAIP-202ENST00000469027 ABCG4Q9H172 646 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 OSBPL2Q9H1P3 480 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 LHX5Q9H2C1 402 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 GTF3C4Q9UKN8 822 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 ATXN7L1Q9ULK2 861 aaPredicted RBP11.26□□□□□ -0.61
TRAIP-202ENST00000469027 PLAAQ9Y263 795 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 PTPRJQ12913 1337 aa11.26□□□□□ -0.61
TRAIP-202ENST00000469027 ZNF840PA6NDX5 716 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 FAM47DPA6NHR8 397 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 EFSO43281 561 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 OPA1O60313 960 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 TYRP14679 529 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 ANXA13P27216 316 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 RPA1P27694 616 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 CASRP41180 1078 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 ZNF132P52740 706 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 USP46P62068 366 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 SKOR1P84550 965 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 IFRD2Q12894 506 aaPredicted RBP11.25□□□□□ -0.61
TRAIP-202ENST00000469027 ECM1Q16610 540 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 TBR1Q16650 682 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 CCDC142Q17RM4 750 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 TPGS1Q6ZTW0 290 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 DENND5BQ6ZUT9 1274 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 ATCAYQ86WG3 371 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 RDH13Q8NBN7 331 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 BHMTQ93088 406 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 HPS3Q969F9 1004 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 BICD1Q96G01 975 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 GEMIN8Q9NWZ8 242 aaKnown RBP11.25□□□□□ -0.61
TRAIP-202ENST00000469027 ARHGAP28Q9P2N2 729 aa11.25□□□□□ -0.61
TRAIP-202ENST00000469027 FBN3Q75N90 2809 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 PCNX1Q96RV3 2341 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-202ENST00000469027 PIRO00625 290 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 SLC16A4O15374 487 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 CACNG3O60359 315 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 TSPAN3O60637 253 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 OLFM2O95897 454 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 OAS1P00973 400 aaKnown RBP11.24□□□□□ -0.61
TRAIP-202ENST00000469027 EPHX1P07099 455 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
TRAIP-202ENST00000469027 COPAP53621 1224 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 MCL1Q07820 350 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 TMEM132DQ14C87 1099 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 PROX2Q3B8N5 592 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 INTS6LQ5JSJ4 861 aaKnown RBP11.24□□□□□ -0.61
TRAIP-202ENST00000469027 CDCP2Q5VXM1 449 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 DIS3L2Q8IYB7 885 aaKnown RBP11.24□□□□□ -0.61
TRAIP-202ENST00000469027 ARL14Q8N4G2 192 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 UCMAQ8WVF2 138 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
TRAIP-202ENST00000469027 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
TRAIP-202ENST00000469027 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms