RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 FAM47BQ8NA70 645 aa17.52■□□□□ 0.39
SREBF1-203ENST00000395751 OTUD5Q96G74 571 aa17.52■□□□□ 0.39
SREBF1-203ENST00000395751 CLPTM1LQ96KA5 538 aa17.52■□□□□ 0.39
SREBF1-203ENST00000395751 GANQ9H2C0 597 aa17.52■□□□□ 0.39
SREBF1-203ENST00000395751 CLEC4MQ9H2X3 399 aaPredicted RBP17.52■□□□□ 0.39
SREBF1-203ENST00000395751 SALL4Q9UJQ4 1053 aa17.52■□□□□ 0.39
SREBF1-203ENST00000395751 NFYCQ13952 458 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 RBBP7Q16576 425 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 CLEC16AQ2KHT3 1053 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 RFWD3Q6PCD5 774 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 ARCQ7LC44 396 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 PPHLN1Q8NEY8 458 aaKnown RBP17.51■□□□□ 0.39
SREBF1-203ENST00000395751 IMPAD1Q9NX62 359 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 USE1Q9NZ43 259 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 MINPP1Q9UNW1 487 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 RWDD3Q9Y3V2 267 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 EVPLLA8MZ36 301 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 BIRC5O15392 142 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SNAP91O60641 907 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 IFNA8P32881 189 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SPDYAQ5MJ70 313 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 PRMT9Q6P2P2 845 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SNX19Q92543 992 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 ABCA8O94911 1581 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SPHKAPQ2M3C7 1700 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 NBNO60934 754 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 ADSSP30520 456 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 IREB2P48200 963 aaKnown RBP17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SLC5A3P53794 718 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 UBASH3BQ8TF42 649 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SPOCK2Q92563 424 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 SEPHS2Q99611 448 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.51■□□□□ 0.39
SREBF1-203ENST00000395751 RIC8BQ9NVN3 520 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 CCDC78A2IDD5 438 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 CCND2P30279 289 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 ATP6V1E1P36543 226 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 CRKLP46109 303 aaKnown RBP17.51■□□□□ 0.39
SREBF1-203ENST00000395751 ALG3Q92685 438 aa17.51■□□□□ 0.39
SREBF1-203ENST00000395751 THUMPD3Q9BV44 507 aaKnown RBP17.51■□□□□ 0.39
SREBF1-203ENST00000395751 RGSL1A5PLK6 1076 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TMEM191CA6NGB0 347 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 MED24O75448 989 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 GTF2H1P32780 548 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 CYP51A1Q16850 503 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 MCOLN2Q8IZK6 566 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TBCCD1Q9NVR7 557 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 USP31Q70CQ4 1352 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 NR5A2O00482 541 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TGDSO95455 350 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 NELFEP18615 380 aaKnown RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PEX2P28328 305 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PTGER2P43116 358 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 EFCAB3Q8N7B9 438 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 C19orf18Q8NEA5 215 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 BLOC1S4Q9NUP1 217 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 A0A1W2PPM1 405 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 SIN3BO75182 1162 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 ZMPSTE24O75844 475 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PDE9AO76083 593 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 SUPT7LO94864 414 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TGM2P21980 687 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 IRF2BP2Q7Z5L9 587 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 AMER2Q8N7J2 671 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 NSMCE2Q96MF7 247 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PNMA5Q96PV4 448 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PIDD1Q9HB75 910 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 ZFYVE16Q7Z3T8 1539 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 RBM47A0AV96 593 aaKnown RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 PSMD3O43242 534 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 CYTH3O43739 400 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 POLR2EP19388 210 aaKnown RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 KCTD19Q17RG1 926 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 CDCA2Q69YH5 1023 aaPredicted RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 ERI1Q8IV48 349 aaKnown RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TCAIMQ8N3R3 496 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 SLC25A23Q9BV35 468 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 ACSS3Q9H6R3 686 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 MOV10Q9HCE1 1003 aaKnown RBP17.5■□□□□ 0.39
SREBF1-203ENST00000395751 LNPEPQ9UIQ6 1025 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 SLC13A4Q9UKG4 626 aa17.5■□□□□ 0.39
SREBF1-203ENST00000395751 TMEM247A6NEH6 219 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 IL12AP29459 219 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 MARCKSL1P49006 195 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 ACOT2P49753 483 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 ITGA7Q13683 1181 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 FASTKQ14296 549 aaKnown RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 COG2Q14746 738 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 SLC1A5Q15758 541 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 HGSNATQ68CP4 663 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 C8orf59Q8N0T1 100 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 FAM84BQ96KN1 310 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 OLFM1Q99784 485 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 PCDH18Q9HCL0 1135 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 MTMR4Q9NYA4 1195 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 SPATA7Q9P0W8 599 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms