RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CACNB3P54284 484 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SCRN3Q0VDG4 424 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 TLR1Q15399 786 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 CHI3L2Q15782 390 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ARSHQ5FYA8 562 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 USP17L1Q7RTZ2 530 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 TRABD2AQ86V40 505 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 DEPDC4Q8N2C3 294 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ELMOD1Q8N336 334 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 MARVELD2Q8N4S9 558 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 FAM47BQ8NA70 645 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SDCCAG3Q96C92 435 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 CTRCQ99895 268 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 FOXP3Q9BZS1 431 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 RSPH9Q9H1X1 276 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 VPS11Q9H270 941 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 KCNK4Q9NYG8 393 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ST14Q9Y5Y6 855 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SIGLEC16A6NMB1 481 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 UCHL3P15374 230 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 CCT3P49368 545 aaKnown RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 NPEPPSP55786 919 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 GPC5P78333 572 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 DNASE1L3Q13609 305 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ZBED5Q49AG3 693 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 UBE2UQ5VVX9 321 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 UGT2A3Q6UWM9 527 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PLEKHM3Q6ZWE6 761 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ARHGEF19Q8IW93 802 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PIAS4Q8N2W9 510 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 RASGRP4Q8TDF6 673 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SH3RF3Q8TEJ3 882 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PBXIP1Q96AQ6 731 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF486Q96H40 463 aaPredicted RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 OSBPL11Q9BXB4 747 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 REXO4Q9GZR2 422 aaKnown RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 SEMA6AQ9H2E6 1030 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 TLE6Q9H808 572 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 FARSBQ9NSD9 589 aaKnown RBP7.87□□□□□ -1.15
VTI1A-201ENST00000393077 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 COMMD8Q9NX08 183 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 AURKCQ9UQB9 309 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 KLHL20Q9Y2M5 609 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 PMF1-BGLAPU3KQ54 211 aa7.87□□□□□ -1.15
VTI1A-201ENST00000393077 RHOBTB1O94844 696 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 CDH1P12830 882 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ATF6P18850 670 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 CCNCP24863 283 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 MAPK4P31152 587 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 NR4A2P43354 598 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 SLC1A5Q15758 541 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 SNAP47Q5SQN1 464 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 RC3H1Q5TC82 1133 aaKnown RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ZNF571Q7Z3V5 609 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 SPARTQ8N0X7 666 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 RSAD2Q8WXG1 361 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TMA16Q96EY4 203 aaKnown RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 FAM163AQ96GL9 167 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 BRIP1Q9BX63 1249 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 KLC2Q9H0B6 622 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 LY9Q9HBG7 655 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ZDHHC18Q9NUE0 388 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 PACSIN3Q9UKS6 424 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 AGTPBP1Q9UPW5 1226 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 XRN1Q8IZH2 1706 aaKnown RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 EMSYQ7Z589 1322 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 PRR5-ARHGAP8B1AHC4 643 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TMEM191BP0C7N4 346 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TMEM253P0C7T8 217 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 GRIA2P42262 883 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 DSTNP60981 165 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ARHGAP8P85298 464 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 GPS1Q13098 491 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 IL23RQ5VWK5 629 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 FAM122CQ6P4D5 195 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 BNC2Q6ZN30 1099 aaPredicted RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 LRP10Q7Z4F1 713 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 CHPT1Q8WUD6 406 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ART4Q93070 314 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 VPS33AQ96AX1 596 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ISOC1Q96CN7 298 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 NEURL2Q9BR09 285 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TIMM22Q9Y584 194 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 AKAP12Q02952 1782 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TRIM64A6NGJ6 449 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TRIM64BA6NI03 449 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 MAGP20916 626 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 CDH15P55291 814 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 PLIN5Q00G26 463 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 MPP2Q14168 576 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 BORAQ6PGQ7 559 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 STXBP4Q6ZWJ1 553 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ADGRG6Q86SQ4 1221 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 SGMS1Q86VZ5 419 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 ESX1Q8N693 406 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 RNF148Q8N7C7 305 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 EXD1Q8NHP7 514 aa7.86□□□□□ -1.15
VTI1A-201ENST00000393077 TRUB1Q8WWH5 349 aaKnown RBP7.86□□□□□ -1.15
VTI1A-201ENST00000393077 BAP1Q92560 729 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms