RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 DHX40Q8IX18 779 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 RERGQ96A58 199 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 RNPC3Q96LT9 517 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 CIPCQ9C0C6 399 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 TAF2Q6P1X5 1199 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 TRPC4APQ8TEL6 797 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 TLR8Q9NR97 1041 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 DPP3Q9NY33 737 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ADAMTS12P58397 1594 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 COX7A2P14406 83 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ITIH2P19823 946 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 CREMQ03060 361 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 RSBN1Q5VWQ0 802 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF280DQ6N043 979 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 RBM7Q9Y580 266 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 MPDZO75970 2070 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 CCDC185Q8N715 623 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 PJA1Q8NG27 643 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 STARD8Q92502 1023 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF512BQ96KM6 892 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 RPRD1AQ96P16 312 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 UGGT1Q9NYU2 1555 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ANXA5P08758 320 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 RBP1P09455 135 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 PRKCEQ02156 737 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 MAD2L1Q13257 205 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 DGKKQ5KSL6 1271 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 GPT2Q8TD30 523 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 SLC9A7Q96T83 725 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF624Q9P2J8 865 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 PDGFRAP16234 1089 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 TKTP29401 623 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 HNRNPH2P55795 449 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 CDH24Q86UP0 819 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ULK2Q8IYT8 1036 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 VPS4BO75351 444 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 NFRKBQ6P4R8 1299 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 C11orf57Q6ZUT1 292 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 FAR1Q8WVX9 515 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 QRFPRQ96P65 431 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 NR5A2O00482 541 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ZBTB39O15060 712 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 ITGB6P18564 788 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 GPD1P21695 349 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 TYW3Q6IPR3 259 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 C6orf62Q9GZU0 229 aaPredicted RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 TMEM51Q9NW97 253 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 EFCAB10A6NFE3 127 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 MYMKA6NI61 221 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 POLRMTO00411 1230 aaKnown RBP11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 NR3C2P08235 984 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 GRIK3Q13003 919 aa11.54□□□□□ -0.56
PTCHD1-201ENST00000379361 A0A0B4J269 797 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 LYNP07948 512 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 EPHB2P29323 1055 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 NTSP30990 170 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 RESTQ13127 1097 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 TUBB3Q13509 450 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 LRRC14Q15048 493 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ANKMY2Q8IV38 441 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 STARD13Q9Y3M8 1113 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 LDOC1O95751 146 aaPredicted RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 GLP2RO95838 553 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 NFKB1P19838 968 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ARF5P84085 180 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 CCDC144BQ3MJ40 725 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 OLFML2BQ68BL8 750 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 FAM228AQ86W67 206 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 RP9Q8TA86 221 aaKnown RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 SLC39A8Q9C0K1 460 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ATP7BP35670 1465 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 AGTP01019 485 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 CHI3L2Q15782 390 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 XKR3Q5GH77 459 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 DENND1BQ6P3S1 775 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 WDR60Q8WVS4 1066 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 AGPAT1Q99943 283 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 FRMD8P1Q9BZ68 369 aaPredicted RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 CCDC166P0CW27 439 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 RPL19P84098 196 aaKnown RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 PRMT9Q6P2P2 845 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 MLPHQ9BV36 600 aaPredicted RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 COL15A1P39059 1388 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 KHDRBS3O75525 346 aaKnown RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 S100A9P06702 114 aaKnown RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 BHLHB9Q6PI77 547 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 TMEM132CQ8N3T6 1108 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 PDP2Q9P2J9 529 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ABCA4P78363 2273 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 SUPT20HL2P0C7V6 817 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF211Q13398 564 aaPredicted RBP11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 ZNF232Q9UNY5 417 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 MROH7-TTC4A0A0A0MT08 1334 aa11.53□□□□□ -0.56
PTCHD1-201ENST00000379361 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms