RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 IARS2Q9NSE4 1012 aaKnown RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TMEM161AQ9NX61 479 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 AKAP7Q9P0M2 348 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 IFRD1O00458 451 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TNK2Q07912 1038 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 RBM20Q5T481 1227 aaKnown RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 NIPA1Q7RTP0 329 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 SH3RF3Q8TEJ3 882 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 LRRC4BQ9NT99 713 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 TMCC3Q9ULS5 477 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 IFNGR2P38484 337 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 VPS72Q15906 364 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 SLC15A2Q16348 729 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 RTL3Q8N8U3 475 aaKnown RBP10.49□□□□□ -0.73
PTCH1-204ENST00000375290 EHD4Q9H223 541 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 CROTQ9UKG9 612 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 BTBD3Q9Y2F9 522 aa10.49□□□□□ -0.73
PTCH1-204ENST00000375290 ATRNO75882 1429 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 H3BMM5 538 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ITGAVP06756 1048 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HARS2P49590 506 aaKnown RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ERVK-9P63128 1117 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HPCAP84074 193 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 BTBD8Q5XKL5 378 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ART4Q93070 314 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 PNPLA8Q9NP80 782 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 WDR37Q9Y2I8 494 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 KLHL20Q9Y2M5 609 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 KRT34O76011 436 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 SLC1A6P48664 564 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HIRAP54198 1017 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ZNF268Q14587 947 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 PDZK1Q5T2W1 519 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 IER5Q5VY09 327 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 LRRC49Q8IUZ0 686 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 DEPDC7Q96QD5 511 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 TSPAN18Q96SJ8 248 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 COQ7Q99807 217 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 RGS18Q9NS28 235 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 MYOM1P52179 1685 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 VPS26AO75436 327 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ATP6AP1LQ52LC2 224 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 SP8Q8IXZ3 490 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 PIK3C3Q8NEB9 887 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 SLC20A1Q8WUM9 679 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 NSMCE2Q96MF7 247 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 IL6P05231 212 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 UQCRBP14927 111 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HOXA13P31271 388 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 CYP2C18P33260 490 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 SCARA5Q6ZMJ2 495 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 C8orf59Q8N0T1 100 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 MASTLQ96GX5 879 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 EHD1Q9H4M9 534 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 G3BP2Q9UN86 482 aaKnown RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 NDUFAF1Q9Y375 327 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 BCAP31P51572 246 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 SPIRE1Q08AE8 756 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ERFEQ4G0M1 354 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 DPP9Q86TI2 863 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 DYNLL2Q96FJ2 89 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ANKHQ9HCJ1 492 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 TBC1D13Q9NVG8 400 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 MARCOQ9UEW3 520 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 MEI4A8MW99 385 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 CDH3P22223 829 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 WARSP23381 471 aaKnown RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 AMPD2Q01433 879 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 NSUN2Q08J23 767 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 TMEM132DQ14C87 1099 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 C4orf50Q6ZRC1 276 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 KLHL31Q9H511 634 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 GSTK1Q9Y2Q3 226 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 TNPO3Q9Y5L0 923 aaKnown RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 SLIT3O75094 1523 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 CDK18Q07002 472 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 CNTN1Q12860 1018 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HIST2H2ACQ16777 129 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HIST2H2AA3Q6FI13 130 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 POTEHQ6S545 545 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 HPS4Q9NQG7 708 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 GABBR1Q9UBS5 961 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 CYP11B2P19099 503 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 NTRK3Q16288 839 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 APOBEC3FQ8IUX4 373 aaKnown RBP10.48□□□□□ -0.73
PTCH1-204ENST00000375290 WDR49Q8IV35 697 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 MICALL2Q8IY33 904 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 DEPDC4Q8N2C3 294 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 ELMO2Q96JJ3 720 aa10.48□□□□□ -0.73
PTCH1-204ENST00000375290 CRTAMO95727 393 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 RPL3P39023 403 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 PIWIL4Q7Z3Z4 852 aaKnown RBP10.47□□□□□ -0.73
PTCH1-204ENST00000375290 URGCPQ8TCY9 931 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 HES6Q96HZ4 224 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 SMARCAD1Q9H4L7 1026 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TMEM216Q9P0N5 145 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 GSAPA4D1B5 854 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 GUCY1A2P33402 732 aa10.47□□□□□ -0.73
PTCH1-204ENST00000375290 TUBA3CQ13748 450 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms