RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CUL1Q13616 776 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ALCAMQ13740 583 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 CSRP2Q16527 193 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 FXNQ16595 210 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 MSMPQ1L6U9 139 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 NCAPH2Q6IBW4 605 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 THAP5Q7Z6K1 395 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 CROCCP2Q86T23 111 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 PLD6Q8N2A8 252 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ARFGAP2Q8N6H7 521 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 C3orf20Q8ND61 904 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM76AQ8TAV0 307 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 CRYGNQ8WXF5 182 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ASB11Q8WXH4 323 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 HAS1Q92839 578 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 NECTIN4Q96NY8 510 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 RUFY1Q96T51 708 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 NAP1L3Q99457 506 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 CDCA3Q99618 268 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 SH3GL2Q99962 352 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 SCNM1Q9BWG6 230 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 KCTD10Q9H3F6 313 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ZSWIM4Q9H7M6 989 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ACAD9Q9H845 621 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 VAT1LQ9HCJ6 419 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 TUFT1Q9NNX1 390 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 OLFML3Q9NRN5 406 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 PCDHA2Q9Y5H9 948 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 HCFC2Q9Y5Z7 792 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 ATXN2Q99700 1313 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 DOCK8Q8NF50 2099 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 CENPEQ02224 2701 aa6.91□□□□□ -1.3
ECHDC1-202ENST00000368289 SPENQ96T58 3664 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SHISA7A6NL88 538 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRIQ3A6PVS8 624 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 F5H6K3 240 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 H3BQF6 201 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ADAMTS3O15072 1205 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC37A4O43826 429 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 LRP3O75074 770 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ZBED4O75132 1171 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 PRPF6O94906 941 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 TDP2O95551 362 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 AFPP02771 609 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 KRT18P05783 430 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 RETP07949 1114 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 FERP16591 822 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 CYP11B2P19099 503 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 EDNRBP24530 442 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SSTR4P31391 388 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SREBF1P36956 1147 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC1A4P43007 532 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 CD97P48960 835 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ALDH5A1P51649 535 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 OAZ1P54368 228 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC12A3P55017 1021 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC7A5Q01650 507 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 KLRC3Q07444 240 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 TNK2Q07912 1038 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 FZD5Q13467 585 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 PPP2R5AQ15172 486 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SF3A2Q15428 464 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ASIC2Q16515 512 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 NKPD1Q17RQ9 610 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 KNOP1Q1ED39 458 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 GNPTABQ3T906 1256 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 DNAJC21Q5F1R6 531 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 KIAA1841Q6NSI8 718 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 C8orf74Q6P047 294 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 LRIG3Q6UXM1 1119 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ANKS3Q6ZW76 656 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 EPM2AIP1Q7L775 607 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRC47Q8N1G4 583 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 SLC44A3Q8N4M1 653 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ACTRT1Q8TDG2 376 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRC15Q8TF66 581 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 DDX1Q92499 740 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 TAF4BQ92750 862 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 LRRC45Q96CN5 670 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 Q96M66 194 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 PLIN2Q99541 437 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ANO3Q9BYT9 981 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 TRIM55Q9BYV6 548 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM129AQ9BZQ8 928 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 UBA5Q9GZZ9 404 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 GDF3Q9NR23 364 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 FAM207AQ9NSI2 230 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 PCMTD2Q9NV79 361 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 MAP3K20Q9NYL2 800 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 ARMCX3Q9UH62 379 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 GGA2Q9UJY4 613 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 TTC7AQ9ULT0 858 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 PCDHB12Q9Y5F1 795 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 PCDHA1Q9Y5I3 950 aa6.9□□□□□ -1.3
ECHDC1-202ENST00000368289 URB1O60287 2271 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-202ENST00000368289 PATJQ8NI35 1801 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms