RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSH1-202ENST00000326495 DNALI1O14645 258 aaPredicted RBP6.52□□□□□ -1.37
SSH1-202ENST00000326495 FAUP35544 74 aaKnown RBP6.52□□□□□ -1.37
SSH1-202ENST00000326495 TCEA2Q15560 299 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 NDUFAF6Q330K2 333 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
SSH1-202ENST00000326495 IRGCQ6NXR0 463 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 DEPDC4Q8N2C3 294 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 ZSWIM1Q9BR11 485 aa6.52□□□□□ -1.37
SSH1-202ENST00000326495 BRWD1Q9NSI6 2320 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 FKBP9O95302 570 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RCVRNP35243 200 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 AP3S2P59780 193 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TMEM132BQ14DG7 1078 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ARHGAP17Q68EM7 881 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 UTS2BQ765I0 119 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 GRPEL2Q8TAA5 225 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PDCD10Q9BUL8 212 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 MROH7-TTC4A0A0A0MT08 1334 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 MPOP05164 745 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 S100A1P23297 94 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CRABP2P29373 138 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ARHGEF7Q14155 803 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CYP4A22Q5TCH4 519 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 FGD2Q7Z6J4 655 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ZBTB10Q96DT7 871 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 BTBD10Q9BSF8 475 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 GPAMQ9HCL2 828 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 HACD1B0YJ81 288 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PRPF4O43172 522 aaKnown RBP eCLIP6.51□□□□□ -1.37
SSH1-202ENST00000326495 TGM2P21980 687 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 GPD2P43304 727 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TMEM132DQ14C87 1099 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 LPCAT2Q7L5N7 544 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ARCQ7LC44 396 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PDPRQ8NCN5 879 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 WDR36Q8NI36 951 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 C6orf203Q9P0P8 240 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 LNPEPQ9UIQ6 1025 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 LCA5LO95447 670 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 WEE2P0C1S8 567 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 MYL12AP19105 171 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RRM1P23921 792 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 LRPAP1P30533 357 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PRKAA1Q13131 559 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SPATS1Q496A3 300 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 LIN54Q6MZP7 749 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RP9Q8TA86 221 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 OXCT2Q9BYC2 517 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 DKK3Q9UBP4 350 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 FNDC3AQ9Y2H6 1198 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 C15orf41Q9Y2V0 281 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SLC30A1Q9Y6M5 507 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 NWD1Q149M9 1564 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 IFT172Q9UG01 1749 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PNPLA6Q8IY17 1366 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PRMT3O60678 531 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 USP10Q14694 798 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 PTPRNQ16849 979 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SH3BP5LQ7L8J4 393 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SH3RF3Q8TEJ3 882 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 FNIP1Q8TF40 1166 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 LRRC40Q9H9A6 602 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 DCP1AQ9NPI6 582 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 PCSK1NQ9UHG2 260 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SLC16A4O15374 487 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ATP6V1G2O95670 118 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 MSL3P1P0C860 447 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 UBTFL6P0CB48 400 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 EIF2B2P49770 351 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 FXR1P51114 621 aaKnown RBP eCLIP6.51□□□□□ -1.37
SSH1-202ENST00000326495 TRIQKQ629K1 86 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TAS2R42Q7RTR8 314 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 AFG1LQ8WV93 481 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SH3KBP1Q96B97 665 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ZBTB39O15060 712 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 NFE2Q16621 373 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 HAUS6Q7Z4H7 955 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TEX13BQ9BXU2 312 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CD248Q9HCU0 757 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ING3Q9NXR8 418 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RAB21Q9UL25 225 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 SPTA1P02549 2419 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 MROH7Q68CQ1 1323 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 FAM208AQ9UK61 1670 aaKnown RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.51□□□□□ -1.37
SSH1-202ENST00000326495 METTL21EPA6NDL7 271 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 RGS5O15539 181 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CYP26A1O43174 497 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TSPAN9O75954 239 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 PDGFRBP09619 1106 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 TPBGLP0DKB5 382 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 COMTP21964 271 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 FASP25445 335 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CAPZA2P47755 286 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ALG11Q2TAA5 492 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 KCNT1Q5JUK3 1230 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 CRELD1Q96HD1 420 aa6.51□□□□□ -1.37
SSH1-202ENST00000326495 ELMO2Q96JJ3 720 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms