RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 STX3Q13277 289 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 CUL3Q13618 768 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 RAD9BQ6WBX8 426 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 RGS9BPQ6ZS82 235 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 PLPPR4Q7Z2D5 763 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 JAMLQ86YT9 394 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 SHCBP1LQ9BZQ2 653 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 DCLK3Q9C098 648 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 IARS2Q9NSE4 1012 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 FAM32AQ9Y421 112 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 RBAK-RBAKDNI3L0D1 243 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 ABCE1P61221 599 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 ESRRGP62508 458 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 PSMD5Q16401 504 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 E4F1Q66K89 784 aaPredicted RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 DEFB106AQ8N104 65 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 ZNF614Q8N883 585 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 NAT16Q8N8M0 369 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 TC2NQ8N9U0 490 aa13.92□□□□□ -0.18
RFFL-201ENST00000315249 RBM12Q9NTZ6 932 aaKnown RBP13.92□□□□□ -0.18
RFFL-201ENST00000315249 PLA2G6O60733 806 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 CRHR2Q13324 411 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 TMEM121Q9BTD3 319 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 PACSIN1Q9BY11 444 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 RNPEPQ9H4A4 650 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 STX18Q9P2W9 335 aaKnown RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 CHD4Q14839 1912 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 FRMPD4Q14CM0 1322 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 FOXP2O15409 715 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 ZW10O43264 779 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 BCL2L1Q07817 233 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 TP53BP2Q13625 1128 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 SETMARQ53H47 684 aaPredicted RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 RSPH1Q8WYR4 309 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 AURKCQ9UQB9 309 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 RIPK3Q9Y572 518 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 TREHO43280 583 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 TADA3O75528 432 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 HAUS5O94927 633 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 YBX3P16989 372 aaKnown RBP eCLIP13.91□□□□□ -0.18
RFFL-201ENST00000315249 MYO1HQ8N1T3 1032 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 VMP1Q96GC9 406 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 PRMT1Q99873 361 aaKnown RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 PDE4DIPQ5VU43 2346 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 O00370 1275 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 CYP3A4P08684 503 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 PRKAA1Q13131 559 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 FOXR1Q6PIV2 292 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 SERPINA13PQ6UXR4 307 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 AKAP7Q9P0M2 348 aaPredicted RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 DYRK1BQ9Y463 629 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 MOXD2PA6NHM9 499 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 SEPT4O43236 478 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 GLUD1P00367 558 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 SNRPAP09012 282 aaKnown RBP13.91□□□□□ -0.18
RFFL-201ENST00000315249 RENBPP51606 427 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 PPIGQ13427 754 aaKnown RBP eCLIP13.91□□□□□ -0.189e-12■■■■□ 24.8
RFFL-201ENST00000315249 ABRAQ8N0Z2 381 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 SPACA7Q96KW9 195 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 ABCC13Q9NSE7 274 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 APPL1Q9UKG1 709 aa13.91□□□□□ -0.18
RFFL-201ENST00000315249 RAD51CO43502 376 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 SELPP16109 830 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 OR1D2P34982 312 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 PLIN5Q00G26 463 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 MAPRE2Q15555 327 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 ZC3H12BQ5HYM0 836 aaKnown RBP13.9□□□□□ -0.18
RFFL-201ENST00000315249 ARHGEF19Q8IW93 802 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 NAF1Q96HR8 494 aaKnown RBP13.9□□□□□ -0.18
RFFL-201ENST00000315249 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
RFFL-201ENST00000315249 CCL16O15467 120 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 GLP2RO95838 553 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 HSPA9P38646 679 aaKnown RBP13.9□□□□□ -0.18
RFFL-201ENST00000315249 DUSP28Q4G0W2 176 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 AGAP9Q5VTM2 703 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 IFNEQ86WN2 208 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 FLCNQ8NFG4 579 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 IL1RL2Q9HB29 575 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 NPHS2Q9NP85 383 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 TCP11X1B4DZS4 312 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 SYN1P17600 705 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 KYNUQ16719 465 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 PATL1Q86TB9 770 aaKnown RBP13.9□□□□□ -0.18
RFFL-201ENST00000315249 SLC44A2Q8IWA5 706 aaPredicted RBP13.9□□□□□ -0.18
RFFL-201ENST00000315249 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 TMEM134Q9H6X4 195 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 IL1BP01584 269 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 LTFP02788 710 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 PYGBP11216 843 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 SLC8A1P32418 973 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 GPC1P35052 558 aa13.9□□□□□ -0.18
RFFL-201ENST00000315249 HSDL1Q3SXM5 330 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms