RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 CHMP1AQ9HD42 196 aaPredicted RBP9.35□□□□□ -0.91
SMC2-201ENST00000286398 ZNF224Q9NZL3 707 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 CRLS1Q9UJA2 301 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 CARD8Q9Y2G2 431 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 SF3B1O75533 1304 aaKnown RBP eCLIP9.35□□□□□ -0.91
SMC2-201ENST00000286398 ERVV-1B6SEH8 477 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 MRASO14807 208 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 TRAPPC3O43617 180 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 SASH3O75995 380 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 PROCP04070 461 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 CLTBP09497 229 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 MYL12AP19105 171 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 WARSP23381 471 aaKnown RBP9.35□□□□□ -0.91
SMC2-201ENST00000286398 PGS1Q32NB8 556 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 RUNDC3AQ59EK9 446 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 CASP12Q6UXS9 341 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 TCP10LQ8TDR4 215 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 YIPF2Q9BWQ6 316 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 ELOVL6Q9H5J4 265 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 JMJD4Q9H9V9 463 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 CORO1CQ9ULV4 474 aaPredicted RBP9.35□□□□□ -0.91
SMC2-201ENST00000286398 GRIN2AQ12879 1464 aa9.35□□□□□ -0.91
SMC2-201ENST00000286398 NCF1BA6NI72 391 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 NCF1CA8MVU1 366 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 EIF3DO15371 548 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMC2-201ENST00000286398 KRT36O76013 467 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SERPINE1P05121 402 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 VIL1P09327 827 aaKnown RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 NCF1P14598 390 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 STAT5AP42229 794 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 STAT5BP51692 787 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ATN1P54259 1190 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 ZNF844Q08AG5 666 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 EPS8Q12929 822 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 PRKAA1Q13131 559 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 NR6A1Q15406 480 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 ERAP2Q6P179 960 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 DENND5BQ6ZUT9 1274 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SPATA2LQ8IUW3 424 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 COA1Q9GZY4 146 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 LIMD1Q9UGP4 676 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 MYL12BO14950 172 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 RIPK2O43353 540 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ACADSBP45954 432 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 RFX3P48380 749 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 CASP4P49662 377 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 GPSM2P81274 684 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SNX32Q86XE0 403 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ZNF614Q8N883 585 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 LENG1Q96BZ8 264 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 GPRASP2Q96D09 838 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 PI4K2AQ9BTU6 479 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 CCSER2Q9H7U1 834 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ATXN10Q9UBB4 475 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 PLXNC1O60486 1568 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 MAGI2Q86UL8 1455 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 DCXO43602 365 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SSNA1O43805 119 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 VPS26AO75436 327 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 APBA3O96018 575 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ZNF806P0C7X5 589 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 PTDSS1P48651 473 aaKnown RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 IFI35P80217 286 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 MPP3Q13368 585 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 TMEM132DQ14C87 1099 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 TSPAN18Q96SJ8 248 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SEMA6AQ9H2E6 1030 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 THAP1Q9NVV9 213 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 HOXC10Q9NYD6 342 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SH3GLB1Q9Y371 365 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 NDUFAF1Q9Y375 327 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 MGAT4DA6NG13 374 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ZSCAN5CA6NGD5 496 aaPredicted RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 CYBBP04839 570 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 RARBP10826 455 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 ETFBP38117 255 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SLC1A6P48664 564 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SNX17Q15036 470 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 TFDP3Q5H9I0 405 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 SAMD4BQ5PRF9 694 aaKnown RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 PSMA8Q8TAA3 256 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 UBA3Q8TBC4 463 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 NACC2Q96BF6 587 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 NIF3L1Q9GZT8 377 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 TRIM17Q9Y577 477 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 TSPAN19P0C672 248 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 HERVK_113P62684 666 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 CDK16Q00536 496 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 FASTKQ14296 549 aaKnown RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 TTLL4Q14679 1199 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 PDK3Q15120 406 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 CDC73Q6P1J9 531 aa9.34□□□□□ -0.91
SMC2-201ENST00000286398 YTHDF3Q7Z739 585 aaKnown RBP9.34□□□□□ -0.91
SMC2-201ENST00000286398 SAPCD2Q86UD0 394 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms