RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Epn2Q8CHU3 595 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Traf3ip2Q8N7N6 555 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 PhykplQ8R1K4 467 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Caskin2Q8VHK1 1201 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Pcdhb1Q91Y08 818 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Mettl13Q91YR5 698 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gemin2Q9CQQ4 269 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tubb2bQ9CWF2 445 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Dph5Q9CWQ0 281 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Sept5Q9Z2Q6 369 aa12.76□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ptpn9O35239 593 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Vti1aO89116 217 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Rps6ka1P18653 724 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Wnt6P22727 364 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ppp3ccP48455 513 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Kcnj6P48542 425 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Usp46P62069 366 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Trim43aQ3TL54 445 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Wdr41Q3UDP0 460 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Fbxw10Q5SUS0 1030 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tsr1Q5SWD9 803 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Irak1Q62406 710 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Trnau1apQ80VC6 287 aaKnown RBP12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 AopepQ8BXQ6 817 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Kdm1bQ8CIG3 826 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Lrrc42Q8R2U7 421 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Nle1Q8VEJ4 485 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Sar1bQ9CQC9 198 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 PgcQ9D7R7 392 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Mapk13Q9Z1B7 366 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Rasgrp1Q9Z1S3 795 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Znf804aA2AKY4 1200 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 A930018M24RikB7ZMY3 218 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gm6588E9Q3K0 461 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 E9QMW4 1145 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 AlpiF8VPQ6 554 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 KlO35082 1014 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ptk2P34152 1090 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Slc1a2P43006 572 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Rpl10aP53026 217 aaKnown RBP12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 YwhazP63101 245 aaKnown RBP12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 LpoQ5SW46 710 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Slc5a10Q5SWY8 596 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tcf4Q60722 670 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Zbtb17Q60821 794 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Naif1Q6PFD7 327 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Paqr9Q6TCG2 375 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Clec2eQ80XD9 204 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Wdr60Q8C761 999 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Il36gQ8R460 164 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 4930519G04RikQ9CPT7 205 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Xab2Q9DCD2 855 aaKnown RBP12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 KcpQ3U492 1550 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tldc2A2ACG1 198 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gm14525B1AZA0 212 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gm2012B1B0R1 212 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Hoxb8P09632 243 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Hoxd13P70217 339 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tmem26Q3UP23 366 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Cd6Q61003 665 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gm14819Q62478 212 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Txndc8Q69AB2 127 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 SpopQ6ZWS8 374 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Fnbp1Q80TY0 616 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Vipas39Q8BGQ1 491 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Cox16Q9CR63 106 aa12.75□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Umodl1Q5DID3 1319 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ighv11-2A0A075B5R8 117 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Zfp472B0V2W5 534 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 C87414E9PWI7 475 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tcp1P11983 556 aaKnown RBP12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Hmga1P17095 107 aaKnown RBP12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ca8P28651 291 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Capza3P70190 299 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Plpp4Q0VBU9 271 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Arhgap30Q640N3 1101 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Rasa4Q6PFQ7 802 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Kirrel3Q8BR86 778 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Btbd6Q8K2J9 488 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Wdr98Q8VC42 657 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Uhrf1Q8VDF2 782 aaKnown RBP12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Pcdhb17Q91VD8 799 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ugp2Q91ZJ5 508 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Fads1Q920L1 447 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Cog8Q9JJA2 640 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gm5483B2RV77 97 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Gm3336J3QMQ6 198 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 SrgnP13609 152 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Ap2a2P17427 938 aaKnown RBP12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Wbp2P97765 261 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Agbl1Q09M05 972 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Skap2Q3UND0 358 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Slc30a9Q5IRJ6 567 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Kpna1Q60960 538 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Cyp3a13Q64464 503 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Znf598Q80YR4 908 aaKnown RBP12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Daam1Q8BPM0 1077 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 CgasQ8C6L5 507 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Fbxl13Q8CDU4 790 aa12.74□□□□□ -0.37
Ddx55-202ENSMUST00000111438 Tbx22Q8K402 517 aa12.74□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms