RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Klc1O88447 541 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Il13ra2O88786 383 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Apoa4P06728 395 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Mmp13P33435 472 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Trpa1Q8BLA8 1125 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Sgms1Q8VCQ6 419 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Pcdhgc5Q91XW9 944 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Pde2aQ922S4 916 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Ppp1r3aQ99MR9 1089 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Erap1Q9EQH2 930 aa11.4□□□□□ -0.58
Scn8a-203ENSMUST00000108908 Olfr271-ps1A0A1L1SQH2 283 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rhbdl2A2AGA4 302 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 FanceB8JJD6 213 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Vmn2r100E9QAZ9 850 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Hmgxb3G3X9M3 1254 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Vmn2r4K7N784 913 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Kif1cO35071 1100 aaKnown RBP11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Pola2P33611 600 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 PrlrQ08501 608 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Dab2ipQ3UHC7 1189 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Zfp957Q3UT76 567 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Foxo6Q70KY4 559 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rmdn2Q8BSE0 410 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 4921511C20RikQ8BVT7 469 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Dennd2aQ8C4S8 1000 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 MyripQ8K3I4 856 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Cgref1Q8R1U2 281 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Olfr615Q8VGY4 313 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Cul2Q9D4H8 745 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Mss51Q9D5Z5 446 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 H2afyQ9QZQ8 372 aaKnown RBP11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Fam205a1D3YZF6 1314 aa11.4□□□□□ -0.59
Scn8a-203ENSMUST00000108908 1700017N19RikA0A087WPJ1 469 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Prdm12A2AJ77 365 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 AlpiF8VPQ6 554 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Olfr611K7N609 323 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Olfr612L7N462 323 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Sox8Q04886 464 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rufy4Q3TYX8 563 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rmdn3Q3UJU9 470 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Scube3Q66PY1 993 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Nkd1Q99MH6 471 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Gm5114W4VSN8 858 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 UmpsP13439 481 aaKnown RBP11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Il1rl1P14719 567 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Htr3aP23979 487 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 WhammQ571B6 793 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Grm6Q5NCH9 871 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 A1cfQ5YD48 595 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Xlr3cQ61806 226 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Iars2Q8BIJ6 1012 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Fbxo9Q8BK06 437 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Slf1Q8R3P9 1054 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Taf11Q99JX1 211 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Acot13Q9CQR4 140 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 CygbQ9CX80 190 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rab27aQ9ERI2 221 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Tfr2Q9JKX3 798 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Trip4Q9QXN3 581 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Tcp10cE9Q046 482 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Kcna3P16390 528 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Spink5Q148R4 1017 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Arl13bQ640N2 427 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Srd5a1Q68FF9 255 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Gpr151Q7TSN6 422 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rbm12b1Q80YR9 836 aaKnown RBP11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Lrrc27Q80YS5 523 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Cdkn2aipQ8BI72 563 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Slc47a1Q8K0H1 567 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Med21Q9CQ39 144 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Myh7Q91Z83 1935 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Ssxb9A2BI93 185 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Zfp882E9Q4R4 555 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 PdynO35417 248 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Rrm1P07742 792 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Usp4P35123 962 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Itga4Q00651 1039 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Arid5aQ3U108 590 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Klrg2Q3UM83 387 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Pgs1Q8BHF7 553 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Btnl9Q8BJE2 536 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Zfp64Q99KE8 643 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Gtf2h1Q9DBA9 547 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Ifi213D3Z5G0 586 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 HdcP23738 662 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Npr3P70180 536 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Scrn3Q3TMH2 418 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Gm1604bQ3TRG0 118 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Atp4aQ64436 1033 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Hist2h2acQ64523 129 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Hist2h2aa1Q6GSS7 130 aaKnown RBP11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Cand2Q6ZQ73 1235 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Ccdc151Q8BSN3 593 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Tor1aip2Q8BYU6 502 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Cd300ldQ8VCH2 221 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Map3k21Q8VDG6 1002 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Tnfaip8l2Q9D8Y7 184 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Slc44a2Q8BY89 706 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Unc45aQ99KD5 944 aa11.39□□□□□ -0.59
Scn8a-203ENSMUST00000108908 Mrpl57Q9CQF8 102 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms