Protein–RNA interactions for Protein: P23738

Hdc, Histidine decarboxylase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HdcP23738 Gm25239-201ENSMUST00000174915 86 ntBASIC38.68■■■■□ 3.78
HdcP23738 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
HdcP23738 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
HdcP23738 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
HdcP23738 Gm15042-201ENSMUST00000120212 883 ntBASIC33.74■■■□□ 2.99
HdcP23738 Gm24109-201ENSMUST00000175489 103 ntBASIC33.53■■■□□ 2.96
HdcP23738 Gm15045-201ENSMUST00000117359 883 ntBASIC33.03■■■□□ 2.88
HdcP23738 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
HdcP23738 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
HdcP23738 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
HdcP23738 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
HdcP23738 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
HdcP23738 Gm23366-201ENSMUST00000175022 89 ntBASIC32.24■■■□□ 2.75
HdcP23738 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
HdcP23738 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HdcP23738 Psd-208ENSMUST00000224556 2034 ntBASIC32.05■■■□□ 2.72
HdcP23738 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
HdcP23738 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HdcP23738 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
HdcP23738 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.31■■■□□ 2.6
HdcP23738 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.24■■■□□ 2.59
HdcP23738 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
HdcP23738 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
HdcP23738 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.12■■■□□ 2.57
HdcP23738 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
HdcP23738 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.93■■■□□ 2.54
HdcP23738 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
HdcP23738 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
HdcP23738 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
HdcP23738 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HdcP23738 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HdcP23738 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
HdcP23738 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HdcP23738 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HdcP23738 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
HdcP23738 Gm25238-201ENSMUST00000174914 89 ntBASIC30.56■■■□□ 2.48
HdcP23738 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.54■■■□□ 2.48
HdcP23738 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
HdcP23738 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.44■■■□□ 2.46
HdcP23738 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HdcP23738 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
HdcP23738 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
HdcP23738 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
HdcP23738 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
HdcP23738 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
HdcP23738 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.97■■■□□ 2.39
HdcP23738 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
HdcP23738 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
HdcP23738 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
HdcP23738 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
HdcP23738 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.74■■■□□ 2.35
HdcP23738 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
HdcP23738 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
HdcP23738 Gm27325-201ENSMUST00000175467 74 ntBASIC29.57■■■□□ 2.32
HdcP23738 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
HdcP23738 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.48■■■□□ 2.31
HdcP23738 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
HdcP23738 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.37■■■□□ 2.29
HdcP23738 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.37■■■□□ 2.29
HdcP23738 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.36■■■□□ 2.29
HdcP23738 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
HdcP23738 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.29■■■□□ 2.28
HdcP23738 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HdcP23738 Gm25262-201ENSMUST00000174934 133 ntBASIC29.21■■■□□ 2.27
HdcP23738 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.16■■■□□ 2.26
HdcP23738 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HdcP23738 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HdcP23738 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HdcP23738 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
HdcP23738 Rab21-202ENSMUST00000218831 843 ntBASIC29.02■■■□□ 2.24
HdcP23738 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
HdcP23738 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.94■■■□□ 2.22
HdcP23738 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.94■■■□□ 2.22
HdcP23738 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.88■■■□□ 2.21
HdcP23738 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
HdcP23738 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
HdcP23738 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
HdcP23738 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.77■■■□□ 2.2
HdcP23738 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.74■■■□□ 2.19
HdcP23738 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
HdcP23738 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
HdcP23738 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.71■■■□□ 2.19
HdcP23738 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
HdcP23738 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
HdcP23738 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
HdcP23738 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.67■■■□□ 2.18
HdcP23738 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.67■■■□□ 2.18
HdcP23738 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
HdcP23738 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
HdcP23738 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
HdcP23738 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HdcP23738 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HdcP23738 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.59■■■□□ 2.17
HdcP23738 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
HdcP23738 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HdcP23738 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
HdcP23738 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
HdcP23738 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HdcP23738 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
HdcP23738 Gm26115-201ENSMUST00000175605 87 ntBASIC28.49■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms