RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Dynlt1P51807 113 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Itga11P61622 1188 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rab34Q64008 259 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Trpa1Q8BLA8 1125 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Igsf8Q8R366 611 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cd300ldQ8VCH2 221 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Epn3Q91W69 636 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Npffr2Q924H0 417 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Slc39a3Q99K24 317 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Slc25a11Q9CR62 314 aaKnown RBP10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Q9D1F3 157 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ddx21Q9JIK5 851 aaKnown RBP10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 ChmQ9QXG2 665 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 IkbkeQ9R0T8 717 aa10.35□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Cdh18E9Q9Q6 790 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Nek2O35942 443 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Slc2a4P14142 509 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Lmnb2P21619 596 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Zfp42P22227 288 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Hoxd8P23463 289 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Tespa1Q3U132 458 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Trim6Q8BGE7 488 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Prr33Q8C494 260 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Kremen2Q8K1S7 461 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ipo4Q8VI75 1082 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ugp2Q91ZJ5 508 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Pde6cQ91ZQ1 861 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Adam33Q923W9 797 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Q9D454 513 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 SgshQ9EQ08 502 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Mta2Q9R190 668 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Bmp15Q9Z0L4 392 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Plxna1P70206 1894 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Apol7bB1AQP7 369 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 FancfE9Q5Z5 343 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 FaxcQ3UMF9 409 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Apol7eQ3UZ24 369 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Tmem237Q3V0J1 427 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dmc1Q61880 340 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 SgczQ8BX51 311 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fam228aQ8CDW1 299 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Abcg3Q99P81 650 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Rfc5Q9D0F6 339 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Jbts17Q8CE72 3214 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 9330159F19RikD3Z623 648 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Kctd18E0CZ26 429 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Man2b1O09159 1013 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gnat1P20612 350 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ctnna1P26231 906 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 LbrQ3U9G9 626 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Nfe2l2Q60795 597 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Nr2e1Q64104 385 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 PdgfrlQ6PE55 375 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 2700097O09RikQ6PGK3 301 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Acad9Q8JZN5 625 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Gle1Q8R322 699 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dhx58Q99J87 678 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 PigxQ99LV7 254 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 AdarQ99MU3 1178 aaKnown RBP10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Fam3aQ9D8T0 230 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Dclk1Q9JLM8 756 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 M1apQ9Z0E1 529 aa10.34□□□□□ -0.75
Ccdc38-201ENSMUST00000092215 Ssxb9A2BI93 185 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Prdm15E9Q8T2 1174 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Speer2E9Q9U2 264 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 FynP39688 537 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gabrr2P56476 465 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 MyorgQ69ZQ1 716 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 March4Q80TE3 409 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Chn2Q80XD1 332 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Impg2Q80XH2 1243 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Samd3Q8C4H2 520 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc137Q8R0K4 290 aaKnown RBP10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc65Q8VHI7 493 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ubxn6Q99PL6 442 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Kbtbd12Q9D618 625 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Gfra4Q9JJT2 260 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 St6galnac4Q9R2B6 360 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ccdc144bE9PVZ3 520 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 C87414E9PWI7 475 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Akap1O08715 857 aaKnown RBP10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Atxn1lP0C7T6 687 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Hmga1P17095 107 aaKnown RBP10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Marcksl1P28667 200 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 CstaP56567 97 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Arhgap26Q6ZQ82 814 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Rnaseh2bQ80ZV0 308 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Efl1Q8C0D5 1127 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Fbxl13Q8CDU4 790 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 PhykplQ8R1K4 467 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Barhl2Q8VIB5 384 aa10.33□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Ugt3a1Q3UP75 523 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 B230104I21RikQ3USW4 141 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Leng8Q8CBY3 785 aaKnown RBP10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 FgbQ8K0E8 481 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 MicalclQ9D5U9 680 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Nkx2-4Q9EQM3 354 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Smarcb1Q9Z0H3 385 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 DgkdE9PUQ8 1220 aa10.32□□□□□ -0.76
Ccdc38-201ENSMUST00000092215 Pex5O09012 639 aa10.32□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms