RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ttll9A2APC3 461 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 TecP24604 630 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ccr1P51675 355 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Il1rapl1P59823 695 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fam83fQ3UKU4 495 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cep295nlQ497N6 533 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Esyt3Q5DTI8 891 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Depdc1aQ8CIG0 804 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dcaf8Q8N7N5 591 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vangl2Q91ZD4 521 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pole3Q9JKP7 145 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Edf1Q9JMG1 148 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Limd1Q9QXD8 668 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ccdc120A2AEV7 629 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Krt28A6BLY7 462 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cdh16O88338 830 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ccng1P51945 294 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tbx1P70323 479 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ugt1a2P70691 533 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Calb2Q08331 271 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Grm2Q14BI2 872 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cep44Q5HZK1 386 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mks1Q5SW45 561 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Orc2Q60862 576 aaKnown RBP10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ugt1a1Q63886 535 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Plk4Q64702 925 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Brat1Q8C3R1 822 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Adamts2Q8C9W3 1213 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr474Q8VFC9 310 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ggt7Q99JP7 662 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rwdd4Q9CPR1 188 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Psma4Q9R1P0 261 aa10.12□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cyp2t4E9PWV0 503 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Galnt4O08832 578 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Serpinb2P12388 415 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Vps26aP40336 327 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Nutm2Q3V0C3 733 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Krt42Q6IFX2 452 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 DstykQ6XUX1 927 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Nlrp4bQ8C6J9 863 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Snx30Q8CE50 437 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 NcaldQ91X97 193 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 ThegQ9JMB1 375 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 MtrA6H5Y3 1253 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kdelc2G5E897 503 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 OmdO35103 423 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 HexdcQ3U4H6 486 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rbm44Q3V089 1013 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 9930111J21Rik1Q5SVP0 844 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gpr151Q7TSN6 422 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 VcpkmtQ8C436 228 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Chst15Q91XQ5 561 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 NlnQ91YP2 704 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tsc22d2E9Q7M2 769 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Trim67Q505D9 768 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Znf280dQ68FE8 974 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Teddm1aQ810U2 305 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 DcakdQ8BHC4 231 aaKnown RBP10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Thoc5Q8BKT7 683 aaKnown RBP10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 TbcdQ8BYA0 1196 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kremen1Q99N43 473 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 1700031M16RikA0A087WSH0 82 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Fbxl16A2RT62 479 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kpna7C0LLJ0 499 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zfp358E9Q8M1 571 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm17093F6XGJ4 214 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ccnd2P30280 289 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Arhgap45Q3TBD2 1116 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Kctd8Q50H33 476 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tcaf3Q6QR59 914 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Btbd10Q80X66 475 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pkn2Q8BWW9 983 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Plac9Q8K262 108 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Satb2Q8VI24 733 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 ScgnQ91WD9 276 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Crtc3Q91X84 619 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pih1d1Q9CQJ2 290 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Chaf1bQ9D0N7 572 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Q9D4A5 307 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Pik3cgQ9JHG7 1102 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Atp6v1g2Q9WTT4 118 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cd97Q9Z0M6 818 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm10406A6NAS4 205 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3373A6NAS7 205 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3252E9PUT9 216 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3002E9PW72 216 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3298E9PW80 205 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3468E9QAJ8 216 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm7535F7CXE4 302 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3667K7N757 205 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Shoc2O88520 582 aaKnown RBP10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Hmgcs2P54869 508 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Rmdn3Q3UJU9 470 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tex24Q5DP50 351 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm3558Q5FWC9 205 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Phc1Q64028 1012 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gpbp1l1Q6NZP2 473 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Sp8Q8BMJ8 486 aa10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gtf3c4Q8BMQ2 817 aaKnown RBP10.11□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gucy1b2Q8BXH3 824 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms