Protein–RNA interactions for Protein: Q5FWC9

Gm3558, Predicted gene 3558, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3558Q5FWC9 Gm25239-201ENSMUST00000174915 86 ntBASIC34,79■■■■□ 3,16
Gm3558Q5FWC9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,23■■■□□ 2,75
Gm3558Q5FWC9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31,75■■■□□ 2,67
Gm3558Q5FWC9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Gm3558Q5FWC9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Gm3558Q5FWC9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30,42■■■□□ 2,46
Gm3558Q5FWC9 Gm15042-201ENSMUST00000120212 883 ntBASIC30,3■■■□□ 2,44
Gm3558Q5FWC9 Gm24109-201ENSMUST00000175489 103 ntBASIC30,19■■■□□ 2,42
Gm3558Q5FWC9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30,16■■■□□ 2,42
Gm3558Q5FWC9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Gm3558Q5FWC9 Psd-208ENSMUST00000224556 2034 ntBASIC29,92■■■□□ 2,38
Gm3558Q5FWC9 Gm15045-201ENSMUST00000117359 883 ntBASIC29,6■■■□□ 2,33
Gm3558Q5FWC9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,31
Gm3558Q5FWC9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,35■■■□□ 2,29
Gm3558Q5FWC9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,24■■■□□ 2,27
Gm3558Q5FWC9 Gm23366-201ENSMUST00000175022 89 ntBASIC29,02■■■□□ 2,24
Gm3558Q5FWC9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,87■■■□□ 2,21
Gm3558Q5FWC9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28,54■■■□□ 2,16
Gm3558Q5FWC9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28,49■■■□□ 2,15
Gm3558Q5FWC9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
Gm3558Q5FWC9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,42■■■□□ 2,14
Gm3558Q5FWC9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Gm3558Q5FWC9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
Gm3558Q5FWC9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28,27■■■□□ 2,12
Gm3558Q5FWC9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Gm3558Q5FWC9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28,21■■■□□ 2,11
Gm3558Q5FWC9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28,17■■■□□ 2,1
Gm3558Q5FWC9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Gm3558Q5FWC9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,01■■■□□ 2,07
Gm3558Q5FWC9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27,98■■■□□ 2,07
Gm3558Q5FWC9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,98■■■□□ 2,07
Gm3558Q5FWC9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27,91■■■□□ 2,06
Gm3558Q5FWC9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27,86■■■□□ 2,05
Gm3558Q5FWC9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27,84■■■□□ 2,05
Gm3558Q5FWC9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27,81■■■□□ 2,04
Gm3558Q5FWC9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27,77■■■□□ 2,04
Gm3558Q5FWC9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Gm3558Q5FWC9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27,7■■■□□ 2,02
Gm3558Q5FWC9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,6■■■□□ 2,01
Gm3558Q5FWC9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27,53■■■□□ 2
Gm3558Q5FWC9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27,53■■■□□ 2
Gm3558Q5FWC9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27,51■■□□□ 1,99
Gm3558Q5FWC9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27,49■■□□□ 1,99
Gm3558Q5FWC9 Gm25238-201ENSMUST00000174914 89 ntBASIC27,49■■□□□ 1,99
Gm3558Q5FWC9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,49■■□□□ 1,99
Gm3558Q5FWC9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,46■■□□□ 1,99
Gm3558Q5FWC9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27,45■■□□□ 1,99
Gm3558Q5FWC9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27,41■■□□□ 1,98
Gm3558Q5FWC9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27,33■■□□□ 1,97
Gm3558Q5FWC9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27,32■■□□□ 1,96
Gm3558Q5FWC9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27,25■■□□□ 1,95
Gm3558Q5FWC9 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,24■■□□□ 1,95
Gm3558Q5FWC9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,22■■□□□ 1,95
Gm3558Q5FWC9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27,19■■□□□ 1,94
Gm3558Q5FWC9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27,11■■□□□ 1,93
Gm3558Q5FWC9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27,09■■□□□ 1,93
Gm3558Q5FWC9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Gm3558Q5FWC9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27,04■■□□□ 1,92
Gm3558Q5FWC9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27,01■■□□□ 1,91
Gm3558Q5FWC9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Gm3558Q5FWC9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26,9■■□□□ 1,9
Gm3558Q5FWC9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26,78■■□□□ 1,88
Gm3558Q5FWC9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,75■■□□□ 1,87
Gm3558Q5FWC9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26,74■■□□□ 1,87
Gm3558Q5FWC9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26,69■■□□□ 1,86
Gm3558Q5FWC9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26,66■■□□□ 1,86
Gm3558Q5FWC9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26,58■■□□□ 1,85
Gm3558Q5FWC9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26,56■■□□□ 1,84
Gm3558Q5FWC9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26,55■■□□□ 1,84
Gm3558Q5FWC9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,55■■□□□ 1,84
Gm3558Q5FWC9 Gm27325-201ENSMUST00000175467 74 ntBASIC26,52■■□□□ 1,84
Gm3558Q5FWC9 Gm10524-201ENSMUST00000181931 1893 ntBASIC26,49■■□□□ 1,83
Gm3558Q5FWC9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Gm3558Q5FWC9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Gm3558Q5FWC9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26,45■■□□□ 1,82
Gm3558Q5FWC9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26,43■■□□□ 1,82
Gm3558Q5FWC9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26,39■■□□□ 1,82
Gm3558Q5FWC9 Gm25262-201ENSMUST00000174934 133 ntBASIC26,37■■□□□ 1,81
Gm3558Q5FWC9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26,36■■□□□ 1,81
Gm3558Q5FWC9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Gm3558Q5FWC9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26,33■■□□□ 1,81
Gm3558Q5FWC9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,19■■□□□ 1,78
Gm3558Q5FWC9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26,18■■□□□ 1,78
Gm3558Q5FWC9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26,13■■□□□ 1,77
Gm3558Q5FWC9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Gm3558Q5FWC9 Rab21-202ENSMUST00000218831 843 ntBASIC26,1■■□□□ 1,77
Gm3558Q5FWC9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26,1■■□□□ 1,77
Gm3558Q5FWC9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,04■■□□□ 1,76
Gm3558Q5FWC9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26,04■■□□□ 1,76
Gm3558Q5FWC9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,03■■□□□ 1,76
Gm3558Q5FWC9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26,02■■□□□ 1,76
Gm3558Q5FWC9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25,97■■□□□ 1,75
Gm3558Q5FWC9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25,97■■□□□ 1,75
Gm3558Q5FWC9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,94■■□□□ 1,74
Gm3558Q5FWC9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25,92■■□□□ 1,74
Gm3558Q5FWC9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25,92■■□□□ 1,74
Gm3558Q5FWC9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25,89■■□□□ 1,74
Gm3558Q5FWC9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,89■■□□□ 1,74
Gm3558Q5FWC9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25,87■■□□□ 1,73
Gm3558Q5FWC9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,87■■□□□ 1,73
Retrieved 100 of 76,532 protein–RNA pairs in 76,5 ms