RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 CLEC4CQ8WTT0 213 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 ETNK1Q9HBU6 452 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 WBP1LQ9NX94 342 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 CYP2C18P33260 490 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 SLC29A2Q14542 456 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 SURF1Q15526 300 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 CCDC6Q16204 474 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 WSCD1Q658N2 575 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 DNAJC14Q6Y2X3 702 aaPredicted RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 TAOK1Q7L7X3 1001 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 REM2Q8IYK8 340 aaPredicted RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 TMEM176AQ96HP8 235 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 DDX23Q9BUQ8 820 aaKnown RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 UBE2OQ9C0C9 1292 aaKnown RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 ZWILCHQ9H900 591 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 DMAP1Q9NPF5 467 aaPredicted RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 TXLNGQ9NUQ3 528 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 ITGA11Q9UKX5 1188 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 CNTN6Q9UQ52 1028 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 M0QYV0 167 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 ARVCFO00192 962 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 PIRO00625 290 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 GABBR2O75899 941 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 BEST1O76090 585 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 MICAL2O94851 1124 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 LBX1P52954 281 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 NKX3-2P78367 333 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 PTPN11Q06124 597 aaPredicted RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 C10orf76Q5T2E6 689 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 RNF43Q68DV7 783 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 FAM47EQ6ZV65 393 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 ENOSF1Q7L5Y1 443 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 LONP2Q86WA8 852 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 AGGF1Q8N302 714 aaeCLIP10.38□□□□□ -0.75
GGA3-221ENST00000614198 DBF4BQ8NFT6 615 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 EPS8L3Q8TE67 593 aaKnown RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 PPP1R10Q96QC0 940 aaKnown RBP10.38□□□□□ -0.75
GGA3-221ENST00000614198 HERPUD2Q9BSE4 406 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 LRMDAQ9H2I8 198 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 DNAJB4Q9UDY4 337 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 TBK1Q9UHD2 729 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 SCOCQ9UIL1 159 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 AMFRQ9UKV5 643 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 PHF24Q9UPV7 400 aa10.38□□□□□ -0.75
GGA3-221ENST00000614198 PDCD11Q14690 1871 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 NT5C1B-RDH14C9J2C7 533 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 KBTBD13C9JR72 458 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 ACSL3O95573 720 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 ERBB2P04626 1255 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 ITGB8P26012 769 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PTDSS1P48651 473 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 AP3M2P53677 418 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 DR1Q01658 176 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PTK7Q13308 1070 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 MAMLD1Q13495 774 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PABPC1LQ4VXU2 614 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 FOXB2Q5VYV0 432 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 DUPD1Q68J44 220 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 ZDHHC14Q8IZN3 488 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 JOSD2Q8TAC2 188 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 MCEEQ96PE7 176 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 NUDCD1Q96RS6 583 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 TMEM209Q96SK2 561 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PAK6Q9NQU5 681 aaPredicted RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 TSPAN16Q9UKR8 245 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 STXBP5LQ9Y2K9 1186 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PCDHGA4Q9Y5G9 962 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PDE4DIPQ5VU43 2346 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 A8MXQ7 604 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 F8VP50 259 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 TLR3O15455 904 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 TPD52L2O43399 206 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 ATP5HO75947 161 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PFKMP08237 780 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 TKTP29401 623 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 CENPCQ03188 943 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 ZNF252P-AS1Q0IIN9 211 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 TTC30AQ86WT1 665 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 SCUBE3Q8IX30 993 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 DNAJC5GQ8N7S2 189 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 PHC3Q8NDX5 983 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 BEST2Q8NFU1 509 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 CFAP61Q8NHU2 1237 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 TMEM237Q96Q45 408 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 MAGEB5Q9BZ81 275 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 FAM192AQ9GZU8 254 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 TSPYL2Q9H2G4 693 aaPredicted RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
GGA3-221ENST00000614198 MTRF1LQ9UGC7 380 aaKnown RBP10.37□□□□□ -0.75
GGA3-221ENST00000614198 RASGRF2O14827 1237 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 GPR182O15218 404 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 DDX3YO15523 660 aaKnown RBP10.36□□□□□ -0.75
GGA3-221ENST00000614198 DDHD2O94830 711 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 GM2AP17900 193 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 CDC42EP1Q00587 391 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 MTA1Q13330 715 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 TRIM60Q495X7 471 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 WASHC2DQ5SRD0 308 aa10.36□□□□□ -0.75
GGA3-221ENST00000614198 PMF1Q6P1K2 205 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms