RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 A0A0A0MRY4 1105 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 BICDL2A1A5D9 508 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 XPO1O14980 1071 aaKnown RBP8.23□□□□□ -1.09
CDH3-209ENST00000569080 P4HA2O15460 535 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 ATG13O75143 517 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 GABBR2O75899 941 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 STC2O76061 302 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 KAT7O95251 611 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 KLKB1P03952 638 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 IRF1P10914 325 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
CDH3-209ENST00000569080 TBXAS1P24557 533 aaPredicted RBP8.23□□□□□ -1.09
CDH3-209ENST00000569080 CNR2P34972 360 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 KIR2DL1P43626 348 aaPredicted RBP8.23□□□□□ -1.09
CDH3-209ENST00000569080 BCAT1P54687 386 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 STX17P56962 302 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 KDSRQ06136 332 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 PDE4CQ08493 712 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 LRMPQ12912 555 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 DMC1Q14565 340 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 LPAL2Q16609 132 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 PM20D1Q6GTS8 502 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 RASSF3Q86WH2 238 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 TMEM25Q86YD3 366 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 ARHGEF19Q8IW93 802 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 CAMKK1Q8N5S9 505 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 GAB3Q8WWW8 586 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 TFAP2BQ92481 460 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 ACDQ96AP0 544 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 RMDN1Q96DB5 314 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 HEXIM2Q96MH2 286 aaKnown RBP8.23□□□□□ -1.09
CDH3-209ENST00000569080 KREMEN1Q96MU8 473 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 UBXN6Q9BZV1 441 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 SPHK2Q9NRA0 654 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 MARK1Q9P0L2 795 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 KIAA1468Q9P260 1216 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 NCDNQ9UBB6 729 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 SH3BP1Q9Y3L3 701 aa8.23□□□□□ -1.09
CDH3-209ENST00000569080 TNRC6BQ9UPQ9 1833 aaKnown RBP8.23□□□□□ -1.09
CDH3-209ENST00000569080 RNF225M0QZC1 329 aaPredicted RBP8.22□□□□□ -1.09
CDH3-209ENST00000569080 TRIM24O15164 1050 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 CACNG3O60359 315 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 ADAM23O75077 832 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 TULP3O75386 442 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 APBB3O95704 486 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 RETP07949 1114 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 PAEPP09466 180 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 ATP5C1P36542 298 aaKnown RBP8.22□□□□□ -1.09
CDH3-209ENST00000569080 PLA2G4AP47712 749 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 PSEN1P49768 467 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 TKTL1P51854 596 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 SEC13P55735 322 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 GCNT1Q02742 428 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 GAD2Q05329 585 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 BST2Q10589 180 aaKnown RBP8.22□□□□□ -1.09
CDH3-209ENST00000569080 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 SIM2Q14190 667 aaPredicted RBP8.22□□□□□ -1.09
CDH3-209ENST00000569080 SGO2Q562F6 1265 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 LCLAT1Q6UWP7 414 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 PRR23BQ6ZRT6 265 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 MIB1Q86YT6 1006 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 IRF2BP1Q8IU81 584 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 PPM1KQ8N3J5 372 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 FAM160A2Q8N612 972 aaPredicted RBP8.22□□□□□ -1.09
CDH3-209ENST00000569080 TERB1Q8NA31 727 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 IL17RCQ8NAC3 791 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 MDGA1Q8NFP4 955 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 EXOC4Q96A65 974 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 NT5C1BQ96P26 610 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 PNKPQ96T60 521 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 HINFPQ9BQA5 517 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 ULBP1Q9BZM6 244 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 NACA2Q9H009 215 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 CD248Q9HCU0 757 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 ARHGEF4Q9NR80 690 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 DLL3Q9NYJ7 618 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 EBF1Q9UH73 591 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 RWDD2AQ9UIY3 292 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 NAGPAQ9UK23 515 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDH3-209ENST00000569080 SLC8A2Q9UPR5 921 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 NCOR2Q9Y618 2525 aa8.22□□□□□ -1.09
CDH3-209ENST00000569080 MYO18AQ92614 2054 aaKnown RBP8.22□□□□□ -1.09
CDH3-209ENST00000569080 YJEFN3A6XGL0 299 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 E7ENQ6 273 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 SGK1O00141 431 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 GFRA2O00451 464 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 AXIN1O15169 862 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 LRP3O75074 770 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 RPP40O75818 363 aaKnown RBP8.21□□□□□ -1.1
CDH3-209ENST00000569080 GNA14O95837 355 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 ZBED1O96006 694 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 CALCAP01258 141 aa8.21□□□□□ -1.1
CDH3-209ENST00000569080 AFPP02771 609 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms